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SCAB_RS41475 alpha-L-rhamnosidase [ Streptomyces scabiei 87.22 ]

Gene ID: 24308764, updated on 15-Apr-2023

Summary

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Gene symbol
SCAB_RS41475
Gene description
alpha-L-rhamnosidase
Locus tag
SCAB_RS41475
Gene type
protein coding
Organism
Streptomyces scabiei 87.22 (strain: 87.22)
Lineage
Bacteria; Actinomycetota; Actinomycetes; Kitasatosporales; Streptomycetaceae; Streptomyces
Old locus tag
SCAB_86711
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Genomic context

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Sequence:
NC_013929.1 (9690227..9693292)

NC_013929.1Genomic Context describing neighboring genes Neighboring gene extracellular solute-binding protein Neighboring gene alpha-L-rhamnosidase Neighboring gene pseudo Neighboring gene FCD domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013929.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Streptomyces scabies 87-22 contains a coronafacic acid-like biosynthetic cluster that contributes to plant-microbe interactions. Bignell DR, et al. Mol Plant Microbe Interact, 2010 Feb. PMID 20064060

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
alpha-L-rhamnosidase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013929.1 Reference assembly

    Range
    9690227..9693292
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_013006050.1 alpha-L-rhamnosidase [Streptomyces scabiei]

    See identical proteins and their annotated locations for WP_013006050.1

    UniProtKB/TrEMBL
    C9Z391
    Conserved Domains (2) summary
    pfam05592
    Location:410 → 972
    Bac_rhamnosid; Bacterial alpha-L-rhamnosidase
    pfam08531
    Location:178 → 363
    Bac_rhamnosid_N; Alpha-L-rhamnosidase N-terminal domain
Nucleotide Protein
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Gene LinkOut

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