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dapE succinyl-diaminopimelate desuccinylase [ Photorhabdus laumondii subsp. laumondii TTO1 ]

Gene ID: 24170469, updated on 17-Feb-2024

Summary

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Gene symbol
dapE
Gene description
succinyl-diaminopimelate desuccinylase
Locus tag
PLU_RS13495
Gene type
protein coding
Organism
Photorhabdus laumondii subsp. laumondii TTO1 (strain: TTO1, sub-species: laumondii)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Morganellaceae; Photorhabdus
Old locus tag
plu2722
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Genomic context

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Sequence:
NC_005126.1 (3229410..3230537)

NC_005126.1Genomic Context describing neighboring genes Neighboring gene response regulator Neighboring gene ArsC family reductase Neighboring gene M15 family metallopeptidase Neighboring gene YpfN family protein Neighboring gene GNAT family N-acetyltransferase Neighboring gene DUF441 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_005126.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Kinetic and spectroscopic characterization of the E134A- and E134D-altered dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase from Haemophilus influenzae. Davis R, et al. J Biol Inorg Chem, 2006 Mar. PMID 16421726
  2. Substrate specificity, metal binding properties, and spectroscopic characterization of the DapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase from Haemophilus influenzae. Bienvenue DL, et al. Biochemistry, 2003 Sep 16. PMID 12962500
  3. DapE can function as an aspartyl peptidase in the presence of Mn2+. Broder DH, et al. J Bacteriol, 2003 Aug. PMID 12896993, Free PMC Article
  4. The genome sequence of the entomopathogenic bacterium Photorhabdus luminescens. Duchaud E, et al. Nat Biotechnol, 2003 Nov. PMID 14528314

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
succinyl-diaminopimelate desuccinylase
WP_011146943.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_005126.1 Reference assembly

    Range
    3229410..3230537
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011146943.1 succinyl-diaminopimelate desuccinylase [Photorhabdus laumondii]

    See identical proteins and their annotated locations for WP_011146943.1

    UniProtKB/Swiss-Prot
    Q7N3J4
    UniProtKB/TrEMBL
    A0A329VJ59
    Conserved Domains (1) summary
    PRK13009
    Location:2 → 374
    PRK13009; succinyl-diaminopimelate desuccinylase; Reviewed
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7N3J4.1