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SPRG_22349 hypothetical protein [ Saprolegnia parasitica CBS 223.65 ]

Gene ID: 24142732, updated on 17-May-2024

Summary

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Gene symbol
SPRG_22349
Gene description
hypothetical protein
Locus tag
SPRG_22349
See related
FungiDB:SPRG_22349; VEuPathDB:SPRG_22349
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Saprolegnia parasitica CBS 223.65 (strain: CBS 223.65)
Lineage
Eukaryota; Stramenopiles; Oomycetes; Saprolegniales; Saprolegniaceae; Saprolegnia
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Genomic context

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Location:
chromosome: Unknown
Exon count:
3

NW_012156582.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene TKL protein kinase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012156582.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Distinctive expansion of potential virulence genes in the genome of the oomycete fish pathogen Saprolegnia parasitica. Jiang RH, et al. PLoS Genet, 2013 Jun. PMID 23785293, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_012156582.1 Reference assembly

    Range
    7376..9379 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012354869.1 → XP_012210259.1  hypothetical protein SPRG_22349 [Saprolegnia parasitica CBS 223.65]

    See identical proteins and their annotated locations for XP_012210259.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A067BKM8
    Conserved Domains (2) summary
    pfam00153
    Location:129 → 214
    Mito_carr; Mitochondrial carrier protein
    pfam00652
    Location:276 → 379
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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