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Tspyl5 testis-specific protein, Y-encoded-like 5 [ Mus musculus (house mouse) ]

Gene ID: 239364, updated on 2-Nov-2024

Summary

Official Symbol
Tspyl5provided by MGI
Official Full Name
testis-specific protein, Y-encoded-like 5provided by MGI
Primary source
MGI:MGI:2442458
See related
Ensembl:ENSMUSG00000038984 AllianceGenome:MGI:2442458
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
6330530B20; E130308C19Rik
Summary
Predicted to enable chromatin binding activity and histone binding activity. Predicted to be involved in several processes, including cellular response to gamma radiation; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction; and positive regulation of protein ubiquitination. Predicted to be located in chromatin. Predicted to be active in nucleus. Orthologous to human TSPYL5 (TSPY like 5). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See Tspyl5 in Genome Data Viewer
Location:
15 B3.1; 15 13.91 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (33684021..33688029, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (33683875..33687883, complement)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene carboxypeptidase Q Neighboring gene ribosomal protein L7-like 1 pseudogene Neighboring gene RIKEN cDNA 4930592A05 gene Neighboring gene STARR-seq mESC enhancer starr_38305 Neighboring gene predicted gene, 53872 Neighboring gene STARR-seq mESC enhancer starr_38306 Neighboring gene STARR-seq mESC enhancer starr_38307 Neighboring gene STARR-seq mESC enhancer starr_38308 Neighboring gene STARR-seq mESC enhancer starr_38309 Neighboring gene STARR-seq mESC enhancer starr_38310 Neighboring gene STARR-seq mESC enhancer starr_38312 Neighboring gene STARR-seq mESC enhancer starr_38313 Neighboring gene STARR-seq mESC enhancer starr_38315 Neighboring gene predicted gene, 41290 Neighboring gene predicted gene 9643

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables chromatin binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables histone binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in chromatin IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
testis-specific Y-encoded-like protein 5
Names
TSPY-like protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001085421.1NP_001078890.1  testis-specific Y-encoded-like protein 5

    See identical proteins and their annotated locations for NP_001078890.1

    Status: VALIDATED

    Source sequence(s)
    AC129208, BC079547, BY715454, BY721490
    Consensus CDS
    CCDS49591.1
    UniProtKB/Swiss-Prot
    Q69ZB3
    Related
    ENSMUSP00000045542.4, ENSMUST00000042021.5
    Conserved Domains (1) summary
    cl08298
    Location:217367
    NAP; Nucleosome assembly protein (NAP)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    33684021..33688029 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)