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CNAG_05799 chitin deacetylase [ Cryptococcus neoformans var. grubii H99 ]

Gene ID: 23889088, updated on 17-May-2024

Summary

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Gene symbol
CNAG_05799
Gene description
chitin deacetylase
Locus tag
CNAG_05799
See related
FungiDB:CNAG_05799; VEuPathDB:CNAG_05799
Gene type
protein coding
RNA name
chitin deacetylase
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. grubii H99 (strain: H99)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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Genomic context

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See CNAG_05799 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
7
Sequence:
Chromosome: 7; NC_026751.1 (908095..910639, complement)

Chromosome 7 - NC_026751.1Genomic Context describing neighboring genes Neighboring gene neurofibromin 1 Neighboring gene 5'-3' exoribonuclease 2 Neighboring gene signal recognition particle subunit SRP9 Neighboring gene large subunit ribosomal protein L33-b Neighboring gene hypothetical protein Neighboring gene D-aspartate oxidase Neighboring gene exo-beta-1,3-glucanase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_026751.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the genome and transcriptome of Cryptococcus neoformans var. grubii reveals complex RNA expression and microevolution leading to virulence attenuation. Janbon G, et al. PLoS Genet, 2014 Apr. PMID 24743168, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

polyA_site

  • Loc: c908187-908187

General protein information

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Preferred Names
chitin deacetylase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_026751.1 Reference assembly

    Range
    908095..910639 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012195148.1 → XP_012050538.1  chitin deacetylase [Cryptococcus neoformans var. grubii H99]

    See identical proteins and their annotated locations for XP_012050538.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    J9VPD7
    UniProtKB/TrEMBL
    A0A854QEI3
    Conserved Domains (1) summary
    cd10952
    Location:159 → 350
    CE4_MrCDA_like; Catalytic NodB homology domain of Mucor rouxii chitin deacetylase and similar proteins
Nucleotide Protein
Heading Accession and Version

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