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CNAG_00483 actin [ Cryptococcus neoformans var. grubii H99 ]

Gene ID: 23884285, updated on 17-May-2024

Summary

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Gene symbol
CNAG_00483
Gene description
actin
Locus tag
CNAG_00483
See related
FungiDB:CNAG_00483; VEuPathDB:CNAG_00483
Gene type
protein coding
RNA name
actin
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. grubii H99 (strain: H99)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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Genomic context

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See CNAG_00483 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Sequence:
Chromosome: 1; NC_026745.1 (1242477..1244675)

Chromosome 1 - NC_026745.1Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene hypothetical protein Neighboring gene 26S proteasome regulatory subunit N10 Neighboring gene hypothetical protein Neighboring gene 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) Neighboring gene hypothetical protein Neighboring gene succinate dehydrogenase assembly factor 2, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_026745.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the genome and transcriptome of Cryptococcus neoformans var. grubii reveals complex RNA expression and microevolution leading to virulence attenuation. Janbon G, et al. PLoS Genet, 2014 Apr. PMID 24743168, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

polyA_site

  • Loc: 1244656-1244656

General protein information

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Preferred Names
actin

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_026745.1 Reference assembly

    Range
    1242477..1244675
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012190935.1 → XP_012046325.1  actin [Cryptococcus neoformans var. grubii H99]

    See identical proteins and their annotated locations for XP_012046325.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    J9VLP4, P48465
    UniProtKB/TrEMBL
    A0A226A241, A0A854QLB3, Q55ZP4, Q5KP06
    Conserved Domains (1) summary
    cl17037
    Location:3 → 377
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
Nucleotide Protein
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