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UMAG_05869 putative carnitine/acyl carnitine carrier [ Mycosarcoma maydis (corn smut) ]

Gene ID: 23565638, updated on 6-Nov-2024

Summary

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Gene symbol
UMAG_05869
Gene description
putative carnitine/acyl carnitine carrier
Locus tag
UMAG_05869
See related
FungiDB:UMAG_05869; VEuPathDB:UMAG_05869
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mycosarcoma maydis (strain: 521, culture-collection: FGSC:9021, type-material: neotype of Uredo maydis)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Mycosarcoma
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Genomic context

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See UMAG_05869 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
2
Sequence:
Chromosome: 20; NC_026497.1 (219098..220161, complement)

Chromosome 20 - NC_026497.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_026497.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis. Kämper J, et al. Nature, 2006 Nov 2. PMID 17080091
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative carnitine/acyl carnitine carrier

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_026497.1 Reference assembly

    Range
    219098..220161 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011393922.1 → XP_011392224.1  putative carnitine/acyl carnitine carrier [Mycosarcoma maydis]

    See identical proteins and their annotated locations for XP_011392224.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1DNX5
    Conserved Domains (2) summary
    PTZ00169
    Location:18 → 281
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:23 → 109
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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