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RIMBP2 RIMS binding protein 2 [ Homo sapiens (human) ]

Gene ID: 23504, updated on 3-Apr-2024

Summary

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Official Symbol
RIMBP2provided by HGNC
Official Full Name
RIMS binding protein 2provided by HGNC
Primary source
HGNC:HGNC:30339
See related
Ensembl:ENSG00000060709 MIM:611602; AllianceGenome:HGNC:30339
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RBP2; RIM-BP2; PPP1R133
Summary
Predicted to be involved in neuromuscular synaptic transmission. Predicted to be located in plasma membrane and synapse. Predicted to be active in presynaptic active zone cytoplasmic component. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in brain (RPKM 6.7), adrenal (RPKM 4.2) and 9 other tissues See more
Orthologs
mouse all
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Genomic context

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Location:
12q24.33
Exon count:
30
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (130396133..130716299, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (130433406..130754746, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (130880678..131200844, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984480 Neighboring gene uncharacterized LOC101927786 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_25825 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_25828 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_25829 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_25830 Neighboring gene piwi like RNA-mediated gene silencing 1 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:130876206-130876706 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr12:130876795-130877994 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_25849 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:130931901-130932400 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:130935063-130935689 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:130938232-130938396 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:130947695-130948194 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:130954155-130954656 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:130954657-130955156 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:130956221-130956721 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7343 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr12:130966855-130967455 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:130988440-130988940 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:130988941-130989441 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:130998885-130999583 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_25887 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr12:131047373-131048572 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_25901 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:131092324-131092520 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:131097951-131098545 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr12:131118450-131118967 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:131145339-131145838 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:131188343-131189087 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:131212975-131213518 Neighboring gene uncharacterized LOC105370080 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:131246445-131247250 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7345 Neighboring gene Sharpr-MPRA regulatory region 14372 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:131271649-131272370 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:131272371-131273092 Neighboring gene Sharpr-MPRA regulatory region 967 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7346 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:131290439-131291361 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:131296228-131296411 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7347 Neighboring gene uncharacterized LOC124903117 Neighboring gene syntaxin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Structure and evolution of RIM-BP genes: identification of a novel family member. Mittelstaedt T, et al. Gene, 2007 Nov 15. PMID 17855024
  2. The RIM/NIM family of neuronal C2 domain proteins. Interactions with Rab3 and a new class of Src homology 3 domain proteins. Wang Y, et al. J Biol Chem, 2000 Jun 30. PMID 10748113
  3. Depletion of LncRNA NEAT1 Rescues Mitochondrial Dysfunction Through NEDD4L-Dependent PINK1 Degradation in Animal Models of Alzheimer's Disease. Huang Z, et al. Front Cell Neurosci, 2020. PMID 32140098, Free PMC Article
  4. Genome-wide association study of Alzheimer's disease with psychotic symptoms. Hollingworth P, et al. Mol Psychiatry, 2012 Dec. PMID 22005930, Free PMC Article
  5. Humoral detection of leukaemia-associated antigens in presentation acute myeloid leukaemia. Guinn BA, et al. Biochem Biophys Res Commun, 2005 Oct 7. PMID 16112646

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. TCF4 Mutations Disrupt Synaptic Function Through Dysregulation of RIMBP2 in Patient-Derived Cortical Neurons.
    Title: TCF4 Mutations Disrupt Synaptic Function Through Dysregulation of RIMBP2 in Patient-Derived Cortical Neurons.
  2. Clinical trial of gene-disease association and gene-environment interaction. (HuGE Navigator)
    Title: Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.
  3. RIMBP2 is identified in humans
    Title: Structure and evolution of RIM-BP genes: identification of a novel family member.
Submit: New GeneRIF Correction

Phenotypes

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Find tests for this gene in the NIH Genetic Testing Registry (GTR)

Review eQTL and phenotype association data in this region using PheGenI

EBI GWAS Catalog

Description
Genome-wide association study of Alzheimer's disease with psychotic symptoms.
EBI GWAS Catalog

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Clone Names

  • KIAA0318, MGC15831

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in neuromuscular synaptic transmission IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in synapse IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
RIMS-binding protein 2
Names
RIM binding protein 2
protein phosphatase 1, regulatory subunit 133

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001351226.2 → NP_001338155.1  RIMS-binding protein 2 isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1), as well as variants 2 and 3, encodes the longest isoform (a).
    Source sequence(s)
    AC063926, AC073912, AC095350
    Consensus CDS
    CCDS91774.1
    UniProtKB/TrEMBL
    A0A8I5QJU8
    Related
    ENSP00000510530.1, ENST00000690669.1
    Conserved Domains (7) summary
    cd12012
    Location:869 → 930
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:973 → 1033
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:317 → 394
    FN3; Fibronectin type 3 domain
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:410 → 473
    fn3; Fibronectin type III domain
    pfam13863
    Location:24 → 85
    DUF4200; Domain of unknown function (DUF4200)

  2. NM_001351227.2 → NP_001338156.1  RIMS-binding protein 2 isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2), as well as variants 1 and 3, encodes the longest isoform (a).
    Source sequence(s)
    AC063926, AC073912, AC095350
    Consensus CDS
    CCDS91774.1
    UniProtKB/TrEMBL
    A0A8I5QJU8
    Conserved Domains (7) summary
    cd12012
    Location:869 → 930
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:973 → 1033
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:317 → 394
    FN3; Fibronectin type 3 domain
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:410 → 473
    fn3; Fibronectin type III domain
    pfam13863
    Location:24 → 85
    DUF4200; Domain of unknown function (DUF4200)

  3. NM_001351228.2 → NP_001338157.1  RIMS-binding protein 2 isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3), as well as variants 1 and 2, encodes the longest isoform (a).
    Source sequence(s)
    AC063926, AC095350
    Consensus CDS
    CCDS91774.1
    UniProtKB/TrEMBL
    A0A8I5QJU8
    Conserved Domains (7) summary
    cd12012
    Location:869 → 930
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:973 → 1033
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:317 → 394
    FN3; Fibronectin type 3 domain
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:410 → 473
    fn3; Fibronectin type III domain
    pfam13863
    Location:24 → 85
    DUF4200; Domain of unknown function (DUF4200)

  4. NM_001351229.2 → NP_001338158.1  RIMS-binding protein 2 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC063926, AC073912, AC095350
    Conserved Domains (6) summary
    cd12012
    Location:869 → 930
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:973 → 1033
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:410 → 473
    fn3; Fibronectin type III domain
    pfam15030
    Location:1 → 92
    DUF4527; Protein of unknown function (DUF4527)

  5. NM_001351230.2 → NP_001338159.1  RIMS-binding protein 2 isoform c

    Status: VALIDATED

    Source sequence(s)
    AC063926, AC073912, AC095350
    UniProtKB/TrEMBL
    A0A9L9PY66
    Related
    ENSP00000516746.1, ENST00000707118.1
    Conserved Domains (7) summary
    cd12012
    Location:869 → 930
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:973 → 1033
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:317 → 394
    FN3; Fibronectin type 3 domain
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:410 → 473
    fn3; Fibronectin type III domain
    pfam13863
    Location:24 → 85
    DUF4200; Domain of unknown function (DUF4200)

  6. NM_001351231.2 → NP_001338160.1  RIMS-binding protein 2 isoform d

    Status: VALIDATED

    Source sequence(s)
    AC063926, AC095350
    Conserved Domains (7) summary
    cd12012
    Location:869 → 930
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:973 → 1033
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:317 → 394
    FN3; Fibronectin type 3 domain
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:410 → 473
    fn3; Fibronectin type III domain
    pfam13863
    Location:24 → 85
    DUF4200; Domain of unknown function (DUF4200)

  7. NM_001351232.2 → NP_001338161.1  RIMS-binding protein 2 isoform f

    Status: VALIDATED

    Source sequence(s)
    AC063926, AC095350
    Consensus CDS
    CCDS91777.1
    UniProtKB/TrEMBL
    A0A2R8YFN7, A0A8I5KQF3
    Related
    ENSP00000509541.1, ENST00000688340.1
    Conserved Domains (4) summary
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:410 → 473
    fn3; Fibronectin type III domain
    pfam15030
    Location:1 → 92
    DUF4527; Protein of unknown function (DUF4527)

  8. NM_001351233.2 → NP_001338162.1  RIMS-binding protein 2 isoform g

    Status: VALIDATED

    Source sequence(s)
    AC063926, AC073912, AC095350
    Conserved Domains (4) summary
    cd12014
    Location:79 → 139
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:208 → 285
    FN3; Fibronectin type 3 domain
    cd00063
    Location:395 → 481
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:301 → 364
    fn3; Fibronectin type III domain

  9. NM_001393614.1 → NP_001380543.1  RIMS-binding protein 2 isoform h

    Status: VALIDATED

    Source sequence(s)
    AC063926, AC073912, AC095350
    Conserved Domains (5) summary
    cd12012
    Location:1108 → 1169
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1212 → 1272
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:317 → 394
    FN3; Fibronectin type 3 domain
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  10. NM_001393615.1 → NP_001380544.1  RIMS-binding protein 2 isoform i

    Status: VALIDATED

    Source sequence(s)
    AC063926, AC095350
    Consensus CDS
    CCDS91775.1
    UniProtKB/TrEMBL
    A0A8I5KWW4
    Conserved Domains (5) summary
    cd12012
    Location:1108 → 1169
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1212 → 1272
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:317 → 394
    FN3; Fibronectin type 3 domain
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  11. NM_001393616.1 → NP_001380545.1  RIMS-binding protein 2 isoform i

    Status: VALIDATED

    Source sequence(s)
    AC063926, AC073912, AC095350
    Consensus CDS
    CCDS91775.1
    UniProtKB/TrEMBL
    A0A8I5KWW4
    Conserved Domains (5) summary
    cd12012
    Location:1108 → 1169
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1212 → 1272
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:317 → 394
    FN3; Fibronectin type 3 domain
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  12. NM_001393617.1 → NP_001380546.1  RIMS-binding protein 2 isoform i

    Status: VALIDATED

    Source sequence(s)
    AC063926, AC073912, AC095350
    Consensus CDS
    CCDS91775.1
    UniProtKB/TrEMBL
    A0A8I5KWW4
    Related
    ENSP00000510770.1, ENST00000689851.1
    Conserved Domains (5) summary
    cd12012
    Location:1108 → 1169
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1212 → 1272
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:317 → 394
    FN3; Fibronectin type 3 domain
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  13. NM_001393618.1 → NP_001380547.1  RIMS-binding protein 2 isoform a

    Status: VALIDATED

    Source sequence(s)
    AC063926, AC095350
    Consensus CDS
    CCDS91774.1
    UniProtKB/TrEMBL
    A0A8I5QJU8
    Conserved Domains (7) summary
    cd12012
    Location:869 → 930
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:973 → 1033
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:317 → 394
    FN3; Fibronectin type 3 domain
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:410 → 473
    fn3; Fibronectin type III domain
    pfam13863
    Location:24 → 85
    DUF4200; Domain of unknown function (DUF4200)

  14. NM_001393619.1 → NP_001380548.1  RIMS-binding protein 2 isoform a

    Status: VALIDATED

    Source sequence(s)
    AC063926, AC073912, AC095350
    Consensus CDS
    CCDS91774.1
    UniProtKB/TrEMBL
    A0A8I5QJU8
    Conserved Domains (7) summary
    cd12012
    Location:869 → 930
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:973 → 1033
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:317 → 394
    FN3; Fibronectin type 3 domain
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:410 → 473
    fn3; Fibronectin type III domain
    pfam13863
    Location:24 → 85
    DUF4200; Domain of unknown function (DUF4200)

  15. NM_001393620.1 → NP_001380549.1  RIMS-binding protein 2 isoform c

    Status: VALIDATED

    Source sequence(s)
    AC063926, AC095350
    UniProtKB/TrEMBL
    A0A9L9PY66
    Conserved Domains (7) summary
    cd12012
    Location:869 → 930
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:973 → 1033
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:317 → 394
    FN3; Fibronectin type 3 domain
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:410 → 473
    fn3; Fibronectin type III domain
    pfam13863
    Location:24 → 85
    DUF4200; Domain of unknown function (DUF4200)

  16. NM_001393621.1 → NP_001380550.1  RIMS-binding protein 2 isoform c

    Status: VALIDATED

    Source sequence(s)
    AC063926, AC073912, AC095350
    UniProtKB/TrEMBL
    A0A9L9PY66
    Conserved Domains (7) summary
    cd12012
    Location:869 → 930
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:973 → 1033
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:317 → 394
    FN3; Fibronectin type 3 domain
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:410 → 473
    fn3; Fibronectin type III domain
    pfam13863
    Location:24 → 85
    DUF4200; Domain of unknown function (DUF4200)

  17. NM_001393622.1 → NP_001380551.1  RIMS-binding protein 2 isoform c

    Status: VALIDATED

    Source sequence(s)
    AC063926, AC073912, AC095350
    UniProtKB/TrEMBL
    A0A9L9PY66
    Conserved Domains (7) summary
    cd12012
    Location:869 → 930
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:973 → 1033
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:317 → 394
    FN3; Fibronectin type 3 domain
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:410 → 473
    fn3; Fibronectin type III domain
    pfam13863
    Location:24 → 85
    DUF4200; Domain of unknown function (DUF4200)

  18. NM_001393623.1 → NP_001380552.1  RIMS-binding protein 2 isoform c

    Status: VALIDATED

    Source sequence(s)
    AC063926, AC073912, AC095350
    UniProtKB/TrEMBL
    A0A9L9PY66
    Conserved Domains (7) summary
    cd12012
    Location:869 → 930
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:973 → 1033
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:317 → 394
    FN3; Fibronectin type 3 domain
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:410 → 473
    fn3; Fibronectin type III domain
    pfam13863
    Location:24 → 85
    DUF4200; Domain of unknown function (DUF4200)

  19. NM_001393624.1 → NP_001380553.1  RIMS-binding protein 2 isoform d

    Status: VALIDATED

    Source sequence(s)
    AC063926, AC073912, AC095350
    Conserved Domains (7) summary
    cd12012
    Location:869 → 930
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:973 → 1033
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:317 → 394
    FN3; Fibronectin type 3 domain
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:410 → 473
    fn3; Fibronectin type III domain
    pfam13863
    Location:24 → 85
    DUF4200; Domain of unknown function (DUF4200)

  20. NM_001393625.1 → NP_001380554.1  RIMS-binding protein 2 isoform j

    Status: VALIDATED

    Source sequence(s)
    AC063926, AC073912, AC095350
    Conserved Domains (6) summary
    cd12012
    Location:869 → 930
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:973 → 1033
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:317 → 394
    FN3; Fibronectin type 3 domain
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam12329
    Location:17 → 86
    TMF_DNA_bd; TATA element modulatory factor 1 DNA binding

  21. NM_001393626.1 → NP_001380555.1  RIMS-binding protein 2 isoform j

    Status: VALIDATED

    Source sequence(s)
    AC063926, AC073912, AC095350
    Conserved Domains (6) summary
    cd12012
    Location:869 → 930
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:973 → 1033
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:317 → 394
    FN3; Fibronectin type 3 domain
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam12329
    Location:17 → 86
    TMF_DNA_bd; TATA element modulatory factor 1 DNA binding

  22. NM_001393627.1 → NP_001380556.1  RIMS-binding protein 2 isoform j

    Status: VALIDATED

    Source sequence(s)
    AC063926, AC095350
    Conserved Domains (6) summary
    cd12012
    Location:869 → 930
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:973 → 1033
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:317 → 394
    FN3; Fibronectin type 3 domain
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam12329
    Location:17 → 86
    TMF_DNA_bd; TATA element modulatory factor 1 DNA binding

  23. NM_001393628.1 → NP_001380557.1  RIMS-binding protein 2 isoform k

    Status: VALIDATED

    Source sequence(s)
    AC063926, AC073912, AC095350
    Conserved Domains (6) summary
    cd12012
    Location:816 → 877
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:920 → 980
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:317 → 394
    FN3; Fibronectin type 3 domain
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam12329
    Location:17 → 86
    TMF_DNA_bd; TATA element modulatory factor 1 DNA binding

  24. NM_001393629.1 → NP_001380558.1  RIMS-binding protein 2 isoform l

    Status: VALIDATED

    Source sequence(s)
    AC063926, AC073912, AC095350
    Consensus CDS
    CCDS91776.1
    UniProtKB/TrEMBL
    A0A2R8Y6Z0
    Related
    ENSP00000509157.1, ENST00000690449.1
    Conserved Domains (7) summary
    cd12012
    Location:1108 → 1169
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1212 → 1272
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:317 → 394
    FN3; Fibronectin type 3 domain
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:410 → 473
    fn3; Fibronectin type III domain
    pfam13863
    Location:24 → 85
    DUF4200; Domain of unknown function (DUF4200)

  25. NM_015347.5 → NP_056162.4  RIMS-binding protein 2 isoform e

    See identical proteins and their annotated locations for NP_056162.4

    Status: VALIDATED

    Source sequence(s)
    AC063926, AC095350
    Consensus CDS
    CCDS31925.1
    UniProtKB/Swiss-Prot
    O15034, Q96ID2
    Related
    ENSP00000261655.4, ENST00000261655.8
    Conserved Domains (5) summary
    cd12012
    Location:852 → 913
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:956 → 1016
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:171 → 231
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd00063
    Location:487 → 573
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:393 → 456
    fn3; Fibronectin type III domain

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    130396133..130716299 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047428628.1 → XP_047284584.1  RIMS-binding protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A2R8Y6Z0
    Related
    ENSP00000495590.1, ENST00000643940.1

  2. XM_047428630.1 → XP_047284586.1  RIMS-binding protein 2 isoform X7

  3. XM_047428629.1 → XP_047284585.1  RIMS-binding protein 2 isoform X6

  4. XM_011538106.4 → XP_011536408.1  RIMS-binding protein 2 isoform X4

    Conserved Domains (6) summary
    cd12012
    Location:937 → 998
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1041 → 1101
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:309 → 369
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd00063
    Location:625 → 711
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:531 → 594
    fn3; Fibronectin type III domain
    cl02488
    Location:50 → 206
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

  5. XM_017019106.2 → XP_016874595.1  RIMS-binding protein 2 isoform X5

  6. XM_011538105.4 → XP_011536407.1  RIMS-binding protein 2 isoform X3

    Conserved Domains (6) summary
    cd12012
    Location:990 → 1051
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1094 → 1154
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:309 → 369
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:438 → 515
    FN3; Fibronectin type 3 domain
    COG1196
    Location:49 → 201
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00063
    Location:625 → 711
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  7. XM_011538103.3 → XP_011536405.1  RIMS-binding protein 2 isoform X1

    Conserved Domains (6) summary
    cd12012
    Location:1229 → 1290
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1333 → 1393
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:309 → 369
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd00063
    Location:625 → 711
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:531 → 594
    fn3; Fibronectin type III domain
    cl02488
    Location:50 → 206
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

  8. XM_017019105.3 → XP_016874594.1  RIMS-binding protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A2R8Y6Z0
    Conserved Domains (7) summary
    cd12012
    Location:1108 → 1169
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1212 → 1272
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:188 → 248
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:317 → 394
    FN3; Fibronectin type 3 domain
    cd00063
    Location:504 → 590
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:410 → 473
    fn3; Fibronectin type III domain
    pfam13863
    Location:24 → 85
    DUF4200; Domain of unknown function (DUF4200)

  9. XM_011538107.4 → XP_011536409.1  RIMS-binding protein 2 isoform X8

    UniProtKB/TrEMBL
    A0A2R8YFN7
    Conserved Domains (4) summary
    cd12014
    Location:309 → 369
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd00063
    Location:625 → 711
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:531 → 594
    fn3; Fibronectin type III domain
    cl02488
    Location:58 → 206
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

  10. XM_011538108.4 → XP_011536410.1  RIMS-binding protein 2 isoform X9

    UniProtKB/TrEMBL
    A0A2R8YFN7
    Conserved Domains (4) summary
    cd12014
    Location:309 → 369
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd00063
    Location:625 → 711
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:531 → 594
    fn3; Fibronectin type III domain
    cl02488
    Location:58 → 206
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    130433406..130754746 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054371607.1 → XP_054227582.1  RIMS-binding protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A2R8Y6Z0

  2. XM_054371613.1 → XP_054227588.1  RIMS-binding protein 2 isoform X7

  3. XM_054371612.1 → XP_054227587.1  RIMS-binding protein 2 isoform X6

  4. XM_054371610.1 → XP_054227585.1  RIMS-binding protein 2 isoform X4

  5. XM_054371611.1 → XP_054227586.1  RIMS-binding protein 2 isoform X5

  6. XM_054371609.1 → XP_054227584.1  RIMS-binding protein 2 isoform X3

  7. XM_054371606.1 → XP_054227581.1  RIMS-binding protein 2 isoform X1

  8. XM_054371608.1 → XP_054227583.1  RIMS-binding protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A2R8Y6Z0

  9. XM_054371614.1 → XP_054227589.1  RIMS-binding protein 2 isoform X8

  10. XM_054371615.1 → XP_054227590.1  RIMS-binding protein 2 isoform X9

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O15034.3 GenPept UniProtKB/Swiss-Prot:O15034

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