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Tmem184c transmembrane protein 184C [ Mus musculus (house mouse) ]

Gene ID: 234463, updated on 2-Nov-2024

Summary

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Official Symbol
Tmem184cprovided by MGI
Official Full Name
transmembrane protein 184Cprovided by MGI
Primary source
MGI:MGI:2384562
See related
Ensembl:ENSMUSG00000031617 AllianceGenome:MGI:2384562
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Tmem34; 8430433H16Rik
Summary
Predicted to enable transmembrane transporter activity. Predicted to be active in membrane. Is expressed in incisor; nervous system; and olfactory epithelium. Orthologous to human TMEM184C (transmembrane protein 184C). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Broad expression in cerebellum adult (RPKM 19.9), CNS E14 (RPKM 16.3) and 23 other tissues See more
Orthologs
human all
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Genomic context

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See Tmem184c in Genome Data Viewer
Location:
8 C1; 8 36.61 cM
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (78322607..78337343, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (77595978..77610714, complement)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene Rho GTPase activating protein 10 Neighboring gene RIKEN cDNA 0610038B21 gene Neighboring gene STARR-seq mESC enhancer starr_21957 Neighboring gene STARR-positive B cell enhancer ABC_E9317 Neighboring gene STARR-positive B cell enhancer ABC_E8249 Neighboring gene STARR-seq mESC enhancer starr_21958 Neighboring gene protein arginine methyltransferase 9 Neighboring gene STARR-positive B cell enhancer ABC_E1761 Neighboring gene RIKEN cDNA 4933431K23 gene Neighboring gene RIKEN cDNA 1700092C02 gene Neighboring gene predicted gene, 39200

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. A neurogenomics approach to gene expression analysis in the developing brain. Jensen P, et al. Brain Res Mol Brain Res, 2004 Dec 20. PMID 15582152
  2. The level of the transcription factor Pax6 is essential for controlling the balance between neural stem cell self-renewal and neurogenesis. Sansom SN, et al. PLoS Genet, 2009 Jun. PMID 19521500, Free PMC Article
  3. Isolation of novel tissue-specific genes from cDNA libraries representing the individual tissue constituents of the gastrulating mouse embryo. Harrison SM, et al. Development, 1995 Aug. PMID 7671812
  4. BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. Magdaleno S, et al. PLoS Biol, 2006 Apr. PMID 16602821, Free PMC Article
  5. Libraries enriched for alternatively spliced exons reveal splicing patterns in melanocytes and melanomas. Watahiki A, et al. Nat Methods, 2004 Dec. PMID 15782199

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

General gene information

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Markers

Homology

Clone Names

  • MGC8158

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
transmembrane protein 184C
Names
transmembrane protein 34

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001364445.1 → NP_001351374.1  transmembrane protein 184C isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC113049, AK033404, CO433630
    Conserved Domains (1) summary
    pfam03619
    Location:90 → 356
    Solute_trans_a; Organic solute transporter Ostalpha

  2. NM_145599.4 → NP_663574.3  transmembrane protein 184C isoform 1

    Status: VALIDATED

    Source sequence(s)
    AK033404, CN532034, CO433630
    Consensus CDS
    CCDS22426.1
    UniProtKB/Swiss-Prot
    Q3TPR7, Q8CCD2, Q99KQ7
    Related
    ENSMUSP00000034030.9, ENSMUST00000034030.15
    Conserved Domains (1) summary
    pfam03619
    Location:49 → 316
    Solute_trans_a; Organic solute transporter Ostalpha

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    78322607..78337343 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q3TPR7.1 GenPept UniProtKB/Swiss-Prot:Q3TPR7

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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