U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TRS-AGA2-3 tRNA-Ser (anticodon AGA) 2-3 [ Homo sapiens (human) ]

Gene ID: 23437, updated on 17-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
TRS-AGA2-3provided by HGNC
Official Full Name
tRNA-Ser (anticodon AGA) 2-3provided by HGNC
Primary source
HGNC:HGNC:16293
See related
MIM:189910; AllianceGenome:HGNC:16293
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNS; TRS2; TRNAS2; tRNA-SER; TRS-AGA2-4
Summary
Hoe et al. (1987) [PubMed 3697066] sequenced a human serine (AGA) tRNA by the dideoxysequencing method and compared it with previously sequenced serine tRNAs.[supplied by OMIM, Sep 2009]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TRS-AGA2-3 in Genome Data Viewer
Location:
6p22.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (27495814..27495895)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (27365401..27365482)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (27463593..27463674)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene tRNA-Ser (anticodon AGA) 2-2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17025 Neighboring gene tRNA-Asp (anticodon GTC) 2-6 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17026 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:27464009-27464509 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24287 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24288 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17027 Neighboring gene tRNA-Ser (anticodon AGA) 2-4 Neighboring gene tRNA-Asp (anticodon GTC) 2-7

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The nucleotide sequence of a gene coding for human serine tRNA. Hoe KL, et al. Nucleic Acids Res, 1987 Dec 10. PMID 3697066, Free PMC Article
  2. Minimal tRNA(Ser) and tRNA(Sec) substrates for human seryl-tRNA synthetase: contribution of tRNA domains to serylation and tertiary structure. Heckl M, et al. FEBS Lett, 1998 May 15. PMID 9637248
  3. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Markers

Other Names

  • tRNA serine (AGA) 2
  • tRNA serine 2 (anticodon AGA)
  • tRNA, serine (AGA)
  • tRNA-Ser-AGA-2-3
  • tRNA-Ser-AGA-2-4
  • transfer RNA serine 2 (anticodon AGA)
  • transfer RNA-Ser (AGA) 2-3
  • transfer RNA-Ser (AGA) 2-4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    27495814..27495895
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    27365401..27365482
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials