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AOL_s00169g247 hypothetical protein [ Orbilia oligospora ATCC 24927 ]

Gene ID: 22896809, updated on 7-Dec-2023

Summary

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Gene symbol
AOL_s00169g247
Gene description
hypothetical protein
Locus tag
AOL_s00169g247
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Orbilia oligospora ATCC 24927 (strain: ATCC 24927, culture-collection: ATCC:24927)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Orbiliomycetes; Orbiliales; Orbiliaceae; Orbilia; Orbilia oligospora
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Genomic context

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See AOL_s00169g247 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_011645726.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011645726.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cellulose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_011125906.1
  • AOL_s00169g247 gene product from transcript AOL_s00169g247r

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_011645726.1 Reference assembly

    Range
    841622..843202 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011127604.1 → XP_011125906.1  hypothetical protein AOL_s00169g247 [Orbilia oligospora ATCC 24927]

    See identical proteins and their annotated locations for XP_011125906.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7C8JW79, A0A7C8VT07, G1XN44
    Conserved Domains (2) summary
    smart00236
    Location:28 → 60
    fCBD; Fungal-type cellulose-binding domain
    cl19188
    Location:136 → 189
    PL-6; Polysaccharide Lyase Family 6
Nucleotide Protein
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