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AOL_s00080g193 hypothetical protein [ Orbilia oligospora ATCC 24927 ]

Gene ID: 22893767, updated on 26-Jun-2024

Summary

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Gene symbol
AOL_s00080g193
Gene description
hypothetical protein
Locus tag
AOL_s00080g193
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Orbilia oligospora ATCC 24927 (strain: ATCC 24927, culture-collection: ATCC:24927)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Orbiliomycetes; Orbiliales; Orbiliaceae; Orbilia; Orbilia oligospora
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Genomic context

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See AOL_s00080g193 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_011645637.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011645637.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fungal-type cell wall organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in fungal-type cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_011122870.1
  • AOL_s00080g193 gene product from transcript AOL_s00080g193r

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_011645637.1 Reference assembly

    Range
    703258..704799
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011124568.1 → XP_011122870.1  hypothetical protein AOL_s00080g193 [Orbilia oligospora ATCC 24927]

    See identical proteins and their annotated locations for XP_011122870.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7C8R8R3, A0A8H2E9J7, G1XEF8
    Conserved Domains (2) summary
    cl16916
    Location:32 → 70
    ChtBD1; Hevein or type 1 chitin binding domain
    cl22861
    Location:91 → 303
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
Nucleotide Protein
Heading Accession and Version

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