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Vmn2r30 vomeronasal 2, receptor 30 [ Mus musculus (house mouse) ]

Gene ID: 22306, updated on 17-Aug-2024

Summary

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Official Symbol
Vmn2r30provided by MGI
Official Full Name
vomeronasal 2, receptor 30provided by MGI
Primary source
MGI:MGI:1316729
See related
Ensembl:ENSMUSG00000070847 AllianceGenome:MGI:1316729
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
V2r15
Summary
Predicted to enable G protein-coupled receptor activity. Predicted to be integral component of plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Vmn2r30 in Genome Data Viewer
Location:
7 A1; 7 4.24 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (7314722..7340530, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (7312211..7337493, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 2, receptor 29 Neighboring gene zinc finger protein 772 pseudogene Neighboring gene chloride channel, voltage-sensitive 4 Neighboring gene microRNA 5620 Neighboring gene predicted gene 3912 Neighboring gene vomeronasal 2, receptor 31

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. A multigene family encoding a diverse array of putative pheromone receptors in mammals. Matsunami H, et al. Cell, 1997 Aug 22. PMID 9288756
  2. Viral Infection-Induced Differential Expression of LncRNAs Associated with Collagen in Mouse Placentas and Amniotic Sacs. Pan J, et al. Am J Reprod Immunol, 2015 Sep. PMID 26073538
  3. V2R gene families degenerated in primates, dog and cow, but expanded in opossum. Young JM, et al. Trends Genet, 2007 May. PMID 17382427
  4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
vomeronasal 2, receptor, 15
Names
vomeronasal organ family 2, receptor, 15
vomeronasal receptor Vmn2r30

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001384913.1 → NP_001371842.1  vomeronasal 2, receptor, 15 isoform 2 precursor

    Status: VALIDATED

    Source sequence(s)
    AC149056
    UniProtKB/TrEMBL
    G3UYU1
    Related
    ENSMUSP00000134223.2, ENSMUST00000174368.9
    Conserved Domains (2) summary
    pfam07562
    Location:512 → 553
    NCD3G; Nine Cysteines Domain of family 3 GPCR
    cl10011
    Location:43 → 503
    Periplasmic_Binding_Protein_type1; Type 1 periplasmic binding fold superfamily

  2. NM_009490.4 → NP_033516.3  vomeronasal 2, receptor, 15 isoform 1 precursor

    Status: VALIDATED

    Source sequence(s)
    AC149056
    Consensus CDS
    CCDS51994.1
    UniProtKB/TrEMBL
    K7N5W1, O35202
    Related
    ENSMUSP00000072296.7, ENSMUST00000072475.9
    Conserved Domains (4) summary
    pfam00003
    Location:599 → 833
    7tm_3; 7 transmembrane sweet-taste receptor of 3 GCPR
    pfam01094
    Location:75 → 453
    ANF_receptor; Receptor family ligand binding region
    pfam07562
    Location:513 → 564
    NCD3G; Nine Cysteines Domain of family 3 GPCR
    cl10011
    Location:43 → 503
    Periplasmic_Binding_Protein_Type_1; Type 1 periplasmic binding fold superfamily

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    7314722..7340530 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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