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E296R AP endonuclease class II [ African swine fever virus ]

Gene ID: 22220362, updated on 18-Aug-2023

Summary

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Gene symbol
E296R
Gene description
AP endonuclease class II
Locus tag
ASFVgp128
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
African swine fever virus (strain: BA71V)
Lineage
Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Asfuvirales; Asfarviridae; Asfivirus
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Genomic context

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Sequence:
NC_001659.2 (151309..152199)

NC_001659.2Genomic Context describing neighboring genes Neighboring gene pE248R Neighboring gene structural protein p14.5 Neighboring gene pE111R Neighboring gene pE66L Neighboring gene pI267L

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001659.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Nucleotide sequence and variability of the inverted terminal repetitions of African swine fever virus DNA. de la Vega I, et al. Virology, 1994 May 15. PMID 8178480
  2. Genes homologous to ubiquitin-conjugating proteins and eukaryotic transcription factor SII in African swine fever virus. Rodriguez JM, et al. Virology, 1992 Jan. PMID 1309282
  3. A gene homologous to topoisomerase II in African swine fever virus. García-Beato R, et al. Virology, 1992 Jun. PMID 1316688
  4. Amino acid sequence and structural properties of protein p12, an African swine fever virus attachment protein. Alcamí A, et al. J Virol, 1992 Jun. PMID 1583732, Free PMC Article
  5. Protein p22 of African swine fever virus: an early structural protein that is incorporated into the membrane of infected cells. Camacho A, et al. Virology, 1991 Mar. PMID 1994575

See all (27) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
AP endonuclease class II
NP_042826.1
  • protein is expressed at early times and accumulates at later times; class II apurinic/apyrimidinic (AP) endonuclease

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001659.2 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_042826.1 AP endonuclease class II [African swine fever virus]

    See identical proteins and their annotated locations for NP_042826.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0C9C6, P0C9C7, Q65202
    UniProtKB/TrEMBL
    A0A0A1DYA6, A0A6G7KTG9, A0A7G2FNZ4, A9JM65
    Conserved Domains (1) summary
    smart00518
    Location:15 → 288
    AP2Ec; AP endonuclease family 2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
2113434ET.1

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