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D339L pD339L [ African swine fever virus ]

Gene ID: 22220334, updated on 18-Aug-2023

Summary

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Gene symbol
D339L
Gene description
pD339L
Locus tag
ASFVgp100
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
African swine fever virus (strain: BA71V)
Lineage
Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Asfuvirales; Asfarviridae; Asfivirus
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Genomic context

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Sequence:
NC_001659.2 (122379..123398, complement)

NC_001659.2Genomic Context describing neighboring genes Neighboring gene pD129L Neighboring gene pD79L Neighboring gene helicase Neighboring gene structural protein p17

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001659.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Nucleotide sequence and variability of the inverted terminal repetitions of African swine fever virus DNA. de la Vega I, et al. Virology, 1994 May 15. PMID 8178480
  2. Genes homologous to ubiquitin-conjugating proteins and eukaryotic transcription factor SII in African swine fever virus. Rodriguez JM, et al. Virology, 1992 Jan. PMID 1309282
  3. A gene homologous to topoisomerase II in African swine fever virus. García-Beato R, et al. Virology, 1992 Jun. PMID 1316688
  4. Amino acid sequence and structural properties of protein p12, an African swine fever virus attachment protein. Alcamí A, et al. J Virol, 1992 Jun. PMID 1583732, Free PMC Article
  5. Protein p22 of African swine fever virus: an early structural protein that is incorporated into the membrane of infected cells. Camacho A, et al. Virology, 1991 Mar. PMID 1994575

See all (27) citations in PubMed

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
pD339L
NP_042798.1
  • contains a protein-protein interaction SHS2 domain with an architecture SHS2_Rpb7-N (pfam03876), characteristic of the SHS2 domains found in N-terminus of the archaeo-eukaryotic RNA polymerase II subunit 7 (RPB7); RNA polymerase subunit 7

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001659.2 Reference assembly

    Range
    122379..123398 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_042798.1 pD339L [African swine fever virus]

    See identical proteins and their annotated locations for NP_042798.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0CAE9, Q89907
    UniProtKB/TrEMBL
    A0A0A1E370, A0A6G6AHC4, A0A6G7KUE2, A9JL76, A9JM10, D4I5U2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
2113434DL.1

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