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NP1450L RNA polymerase subunit 1 [ African swine fever virus ]

Gene ID: 22220328, updated on 18-Aug-2023

Summary

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Gene symbol
NP1450L
Gene description
RNA polymerase subunit 1
Locus tag
ASFVgp094
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
African swine fever virus (strain: BA71V)
Lineage
Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Asfuvirales; Asfarviridae; Asfivirus
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Genomic context

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Sequence:
NC_001659.2 (112254..116606, complement)

NC_001659.2Genomic Context describing neighboring genes Neighboring gene DNA polymerase beta-like protein Neighboring gene structural protein p12 Neighboring gene DNA ligase Neighboring gene guanylyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001659.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the complete nucleotide sequence of African swine fever virus. Yáñez RJ, et al. Virology, 1995 Apr 1. PMID 11831707
  2. A set of African swine fever virus tandem repeats shares similarities with SAR-like sequences. Almazán F, et al. J Gen Virol, 1995 Apr. PMID 9049318
  3. African swine fever virus encodes two genes which share significant homology with the two largest subunits of DNA-dependent RNA polymerases. Yáñez RJ, et al. Nucleic Acids Res, 1993 May 25. PMID 8506138, Free PMC Article
  4. Structure and expression in E. coli of the gene coding for protein p10 of African swine fever virus. Muñoz M, et al. Arch Virol, 1993. PMID 8503790
  5. Sequence and characterization of the major early phosphoprotein p32 of African swine fever virus. Prados FJ, et al. J Virol, 1993 May. PMID 8474154, Free PMC Article

See all (27) citations in PubMed

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
RNA polymerase subunit 1
NP_042792.1
  • gene expression: late

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001659.2 Reference assembly

    Range
    112254..116606 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_042792.1 RNA polymerase subunit 1 [African swine fever virus]

    See identical proteins and their annotated locations for NP_042792.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P42486
    UniProtKB/TrEMBL
    A0A6G6AGM2
    Conserved Domains (5) summary
    TIGR02390
    Location:7 → 861
    RNA_pol_rpoA1; DNA-directed RNA polymerase subunit A'
    cl11429
    Location:1022 → 1432
    RNAP_largest_subunit_C; Largest subunit of RNA polymerase (RNAP), C-terminal domain
    pfam04992
    Location:860 → 941
    RNA_pol_Rpb1_6; RNA polymerase Rpb1, domain 6
    pfam04998
    Location:795 → 1384
    RNA_pol_Rpb1_5; RNA polymerase Rpb1, domain 5
    cl19114
    Location:7 → 861
    RNAP_largest_subunit_N; Largest subunit of RNA polymerase (RNAP), N-terminal domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
2113434DE.1

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