U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

n-TUtca2 nuclear encoded tRNA selenocysteine 2 (anticodon TCA) [ Mus musculus (house mouse) ]

Gene ID: 22069, updated on 1-Jul-2024

Summary

Official Symbol
n-TUtca2provided by MGI
Official Full Name
nuclear encoded tRNA selenocysteine 2 (anticodon TCA)provided by MGI
Primary source
MGI:MGI:4414022
See related
AllianceGenome:MGI:4414022
Gene type
tRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Trsp; n-Ts2; Trnau1; tRNA-Sec
Summary
Enables triplet codon-amino acid adaptor activity. Acts upstream of or within selenocysteine incorporation. Used to study connective tissue disease. [provided by Alliance of Genome Resources, Apr 2022]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See n-TUtca2 in Genome Data Viewer
Location:
7 A3; 7 9.56 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (19035169..19035255)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative) Neighboring gene reticulon 2 (Z-band associated protein) Neighboring gene STARR-positive B cell enhancer ABC_E1082 Neighboring gene STARR-positive B cell enhancer ABC_E9021 Neighboring gene FBJ osteosarcoma oncogene B Neighboring gene STARR-positive B cell enhancer ABC_E11736 Neighboring gene RIKEN cDNA D830036C21 gene Neighboring gene VISTA enhancer mm567

Genomic regions, transcripts, and products

Genomic Sequence:
NC_000073.7 Chromosome 7 Reference GRCm39 C57BL/6J

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Other Names

  • opal suppressor
  • selenocysteine tRNA
  • tRNA Sec
  • tRNA phosphoserine
  • transfer RNA selenocysteine 1 (anticodon UCA)

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables antioxidant activity IDA
Inferred from Direct Assay
more info
PubMed 
enables triplet codon-amino acid adaptor activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within GABAergic neuron differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within anagen IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within cell population proliferation IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within cerebellar Purkinje cell differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within cerebellum morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within determination of adult lifespan IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within epidermis development IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within gene expression IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within hair follicle morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within inflammatory response IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within keratinocyte apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within keratinocyte differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within macrophage migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within multicellular organism growth IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within neuromuscular process IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within neuromuscular process controlling posture IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within reactive oxygen species biosynthetic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within regulation of catalytic activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within response to Gram-negative bacterium IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within response to lipopolysaccharide IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within selenocysteine incorporation IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within selenocysteine incorporation IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within skin development IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    19035169..19035255
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)