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Trhr thyrotropin releasing hormone receptor [ Mus musculus (house mouse) ]

Gene ID: 22045, updated on 2-Nov-2024

Summary

Official Symbol
Trhrprovided by MGI
Official Full Name
thyrotropin releasing hormone receptorprovided by MGI
Primary source
MGI:MGI:98824
See related
Ensembl:ENSMUSG00000038760 AllianceGenome:MGI:98824
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
TRH-R1
Summary
Predicted to enable identical protein binding activity and thyrotropin-releasing hormone receptor activity. Predicted to be involved in phospholipase C-activating G protein-coupled receptor signaling pathway; positive regulation of cytosolic calcium ion concentration; and positive regulation of protein-containing complex assembly. Predicted to be located in cell surface. Is expressed in several structures, including alimentary system; brain; heart; sensory organ; and skeleton. Used to study congenital hypothyroidism. Human ortholog(s) of this gene implicated in congenital nongoitrous hypothyroidism 7 and hypertension. Orthologous to human TRHR (thyrotropin releasing hormone receptor). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See Trhr in Genome Data Viewer
Location:
15 B3.2; 15 16.82 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (44059314..44099308)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (44195924..44235912)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_38558 Neighboring gene STARR-seq mESC enhancer starr_38559 Neighboring gene SUMO-conjugating enzyme UBC9 pseudogene Neighboring gene transmembrane protein 74 Neighboring gene STARR-seq mESC enhancer starr_38560 Neighboring gene STARR-seq mESC enhancer starr_38561 Neighboring gene STARR-seq mESC enhancer starr_38563 Neighboring gene STARR-seq mESC enhancer starr_38565 Neighboring gene STARR-seq mESC enhancer starr_38567 Neighboring gene predicted gene, 33793 Neighboring gene eukaryotic translation initiation factor 2, subunit 1 alpha pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

General gene information

Markers

Clone Names

  • MGC124380, MGC124381

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables thyrotropin-releasing hormone receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables thyrotropin-releasing hormone receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables thyrotropin-releasing hormone receptor activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in cell surface ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
thyrotropin-releasing hormone receptor
Names
TRH-R
thyroliberin receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_013696.2NP_038724.1  thyrotropin-releasing hormone receptor

    See identical proteins and their annotated locations for NP_038724.1

    Status: VALIDATED

    Source sequence(s)
    AC132870, BB653069, BC128269
    Consensus CDS
    CCDS37068.1
    UniProtKB/Swiss-Prot
    P21761
    UniProtKB/TrEMBL
    Q32MS1, Q3UYL6
    Related
    ENSMUSP00000036320.7, ENSMUST00000038856.14
    Conserved Domains (2) summary
    pfam00001
    Location:42320
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:33165
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    44059314..44099308
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006520748.3XP_006520811.1  thyrotropin-releasing hormone receptor isoform X1

    Conserved Domains (2) summary
    cd14964
    Location:2753
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:26219
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily