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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001329647.2 → NP_001316576.1 zinc finger protein 25 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest isoform (a). Variants 1-3 all encode the same isoform (a).
- Source sequence(s)
-
AL117337
- Conserved Domains (5) summary
-
- smart00349
Location:12 → 72
- KRAB; krueppel associated box
- COG5048
Location:148 → 457
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:264 → 284
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam01352
Location:12 → 51
- KRAB; KRAB box
- pfam13465
Location:248 → 273
- zf-H2C2_2; Zinc-finger double domain
-
NM_001329648.2 → NP_001316577.1 zinc finger protein 25 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) encodes isoform a, as do variants 1 and 3.
- Source sequence(s)
-
AL117337
- Conserved Domains (5) summary
-
- smart00349
Location:12 → 72
- KRAB; krueppel associated box
- COG5048
Location:148 → 457
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:264 → 284
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam01352
Location:12 → 51
- KRAB; KRAB box
- pfam13465
Location:248 → 273
- zf-H2C2_2; Zinc-finger double domain
-
NM_001329649.2 → NP_001316578.1 zinc finger protein 25 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) encodes isoform a, as do variants 1 and 2.
- Source sequence(s)
-
AL117337, DA306585
- Conserved Domains (5) summary
-
- smart00349
Location:12 → 72
- KRAB; krueppel associated box
- COG5048
Location:148 → 457
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:264 → 284
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam01352
Location:12 → 51
- KRAB; KRAB box
- pfam13465
Location:248 → 273
- zf-H2C2_2; Zinc-finger double domain
-
NM_001329650.2 → NP_001316579.1 zinc finger protein 25 isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) encodes isoform b, as do variants 4, 6, 7, 8, and 9.
- Source sequence(s)
-
AL117337
- Consensus CDS
-
CCDS7195.1
- UniProtKB/Swiss-Prot
- A9Z1X5, P17030, Q8IYE3, Q8NDD6, Q96MU2
- Conserved Domains (5) summary
-
- smart00349
Location:8 → 68
- KRAB; krueppel associated box
- COG5048
Location:144 → 453
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:260 → 280
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam01352
Location:8 → 47
- KRAB; KRAB box
- pfam13465
Location:244 → 269
- zf-H2C2_2; Zinc-finger double domain
-
NM_001329651.2 → NP_001316580.1 zinc finger protein 25 isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) encodes isoform b, as do variants 4, 5, 7, 8, and 9.
- Source sequence(s)
-
AL117337
- Consensus CDS
-
CCDS7195.1
- UniProtKB/Swiss-Prot
- A9Z1X5, P17030, Q8IYE3, Q8NDD6, Q96MU2
- Conserved Domains (5) summary
-
- smart00349
Location:8 → 68
- KRAB; krueppel associated box
- COG5048
Location:144 → 453
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:260 → 280
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam01352
Location:8 → 47
- KRAB; KRAB box
- pfam13465
Location:244 → 269
- zf-H2C2_2; Zinc-finger double domain
-
NM_001329652.2 → NP_001316581.1 zinc finger protein 25 isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (7) encodes isoform b, as do variants 4, 5, 6, 8, and 9.
- Source sequence(s)
-
AL117337
- Consensus CDS
-
CCDS7195.1
- UniProtKB/Swiss-Prot
- A9Z1X5, P17030, Q8IYE3, Q8NDD6, Q96MU2
- Conserved Domains (5) summary
-
- smart00349
Location:8 → 68
- KRAB; krueppel associated box
- COG5048
Location:144 → 453
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:260 → 280
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam01352
Location:8 → 47
- KRAB; KRAB box
- pfam13465
Location:244 → 269
- zf-H2C2_2; Zinc-finger double domain
-
NM_001329653.2 → NP_001316582.1 zinc finger protein 25 isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (8) encodes isoform b, as do variants 4, 5, 6, 7, and 9.
- Source sequence(s)
-
AL117337
- Consensus CDS
-
CCDS7195.1
- UniProtKB/Swiss-Prot
- A9Z1X5, P17030, Q8IYE3, Q8NDD6, Q96MU2
- Conserved Domains (5) summary
-
- smart00349
Location:8 → 68
- KRAB; krueppel associated box
- COG5048
Location:144 → 453
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:260 → 280
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam01352
Location:8 → 47
- KRAB; KRAB box
- pfam13465
Location:244 → 269
- zf-H2C2_2; Zinc-finger double domain
-
NM_001329654.2 → NP_001316583.1 zinc finger protein 25 isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (9) encodes isoform b, as do variants 4-8.
- Source sequence(s)
-
AL117337, DA113590
- Consensus CDS
-
CCDS7195.1
- UniProtKB/Swiss-Prot
- A9Z1X5, P17030, Q8IYE3, Q8NDD6, Q96MU2
- Conserved Domains (5) summary
-
- smart00349
Location:8 → 68
- KRAB; krueppel associated box
- COG5048
Location:144 → 453
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:260 → 280
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam01352
Location:8 → 47
- KRAB; KRAB box
- pfam13465
Location:244 → 269
- zf-H2C2_2; Zinc-finger double domain
-
NM_001329655.2 → NP_001316584.1 zinc finger protein 25 isoform c
Status: VALIDATED
- Source sequence(s)
-
AL117337, DA320329
-
NM_001329656.2 → NP_001316585.1 zinc finger protein 25 isoform d
Status: VALIDATED
- Description
- Transcript Variant: This variant (11) encodes isoform d, as do variants 11-19.
- Source sequence(s)
-
AL117337
- Conserved Domains (4) summary
-
- smart00349
Location:1 → 32
- KRAB; krueppel associated box
- COG5048
Location:108 → 417
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:224 → 244
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam13465
Location:208 → 233
- zf-H2C2_2; Zinc-finger double domain
-
NM_001329657.2 → NP_001316586.1 zinc finger protein 25 isoform d
Status: VALIDATED
- Description
- Transcript Variant: This variant (12) encodes isoform d, as do variants 11 and 13-9.
- Source sequence(s)
-
AL117337
- Conserved Domains (4) summary
-
- smart00349
Location:1 → 32
- KRAB; krueppel associated box
- COG5048
Location:108 → 417
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:224 → 244
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam13465
Location:208 → 233
- zf-H2C2_2; Zinc-finger double domain
-
NM_001329658.2 → NP_001316587.1 zinc finger protein 25 isoform d
Status: VALIDATED
- Description
- Transcript Variant: This variant (13) encodes isoform d, as do variants 11-12 and 14-19.
- Source sequence(s)
-
AL117337
- Conserved Domains (4) summary
-
- smart00349
Location:1 → 32
- KRAB; krueppel associated box
- COG5048
Location:108 → 417
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:224 → 244
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam13465
Location:208 → 233
- zf-H2C2_2; Zinc-finger double domain
-
NM_001329659.2 → NP_001316588.1 zinc finger protein 25 isoform d
Status: VALIDATED
- Description
- Transcript Variant: This variant (14) encodes isoform d, as do variants 11-13 and 15-19.
- Source sequence(s)
-
AL117337
- Conserved Domains (4) summary
-
- smart00349
Location:1 → 32
- KRAB; krueppel associated box
- COG5048
Location:108 → 417
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:224 → 244
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam13465
Location:208 → 233
- zf-H2C2_2; Zinc-finger double domain
-
NM_001329660.2 → NP_001316589.1 zinc finger protein 25 isoform d
Status: VALIDATED
- Description
- Transcript Variant: This variant (15) encodes isoform d, as do variants 11-14 and 16-19.
- Source sequence(s)
-
AL117337
- Conserved Domains (4) summary
-
- smart00349
Location:1 → 32
- KRAB; krueppel associated box
- COG5048
Location:108 → 417
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:224 → 244
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam13465
Location:208 → 233
- zf-H2C2_2; Zinc-finger double domain
-
NM_001329661.2 → NP_001316590.1 zinc finger protein 25 isoform d
Status: VALIDATED
- Description
- Transcript Variant: This variant (16) encodes isoform d, as do variants 11-15 and 17-19.
- Source sequence(s)
-
AL117337
- Conserved Domains (4) summary
-
- smart00349
Location:1 → 32
- KRAB; krueppel associated box
- COG5048
Location:108 → 417
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:224 → 244
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam13465
Location:208 → 233
- zf-H2C2_2; Zinc-finger double domain
-
NM_001329662.2 → NP_001316591.1 zinc finger protein 25 isoform d
Status: VALIDATED
- Description
- Transcript Variant: This variant (17) encodes isoform d, as do variants 11-16 and 18-19.
- Source sequence(s)
-
AL117337
- Conserved Domains (4) summary
-
- smart00349
Location:1 → 32
- KRAB; krueppel associated box
- COG5048
Location:108 → 417
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:224 → 244
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam13465
Location:208 → 233
- zf-H2C2_2; Zinc-finger double domain
-
NM_001329663.2 → NP_001316592.1 zinc finger protein 25 isoform d
Status: VALIDATED
- Description
- Transcript Variant: This variant (18) encodes isoform d, as do variants 11-17 and 19.
- Source sequence(s)
-
AL117337
- Conserved Domains (4) summary
-
- smart00349
Location:1 → 32
- KRAB; krueppel associated box
- COG5048
Location:108 → 417
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:224 → 244
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam13465
Location:208 → 233
- zf-H2C2_2; Zinc-finger double domain
-
NM_001329664.2 → NP_001316593.1 zinc finger protein 25 isoform d
Status: VALIDATED
- Description
- Transcript Variant: This variant (19) encodes isoform d, as do variants 11-18.
- Source sequence(s)
-
AL117337
- Conserved Domains (4) summary
-
- smart00349
Location:1 → 32
- KRAB; krueppel associated box
- COG5048
Location:108 → 417
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:224 → 244
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam13465
Location:208 → 233
- zf-H2C2_2; Zinc-finger double domain
-
NM_145011.4 → NP_659448.1 zinc finger protein 25 isoform b
See identical proteins and their annotated locations for NP_659448.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) encodes isoform b, as do variants 5-9.
- Source sequence(s)
-
AL117337, BP229986
- Consensus CDS
-
CCDS7195.1
- UniProtKB/Swiss-Prot
- A9Z1X5, P17030, Q8IYE3, Q8NDD6, Q96MU2
- Related
- ENSP00000302222.7, ENST00000302609.8
- Conserved Domains (5) summary
-
- smart00349
Location:8 → 68
- KRAB; krueppel associated box
- COG5048
Location:144 → 453
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:260 → 280
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam01352
Location:8 → 47
- KRAB; KRAB box
- pfam13465
Location:244 → 269
- zf-H2C2_2; Zinc-finger double domain
RNA
-
NR_138062.2 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL117337
-
NR_138063.2 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL117337
-
NR_138064.2 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL117337
-
NR_138065.2 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL117337
-
NR_138066.2 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL117337
-
NR_138067.2 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL117337
-
NR_138068.2 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL117337
-
NR_138069.2 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL117337, DB042775
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000010.11 Reference GRCh38.p14 Primary Assembly
- Range
-
37949573..37976647 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047424716.1 → XP_047280672.1 zinc finger protein 25 isoform X1
Alternate T2T-CHM13v2.0
Genomic
-
NC_060934.1 Alternate T2T-CHM13v2.0
- Range
-
37993572..38020648 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054365011.1 → XP_054220986.1 zinc finger protein 25 isoform X1