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FOLH1B folate hydrolase 1B (pseudogene) [ Homo sapiens (human) ]

Gene ID: 219595, updated on 2-Nov-2024

Summary

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Official Symbol
FOLH1Bprovided by HGNC
Official Full Name
folate hydrolase 1B (pseudogene)provided by HGNC
Primary source
HGNC:HGNC:13636
See related
MIM:609020; AllianceGenome:HGNC:13636
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
PSM; FOLH2; FOLHP; PSMAL; PSMA-LIKE
Summary
Enables metallocarboxypeptidase activity. Involved in C-terminal protein deglutamylation. Located in extracellular exosome. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in duodenum (RPKM 38.8), prostate (RPKM 20.3) and 6 other tissues See more
Orthologs
all
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Genomic context

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See FOLH1B in Genome Data Viewer
Location:
11q14.3
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (89659268..89698718)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (89578945..89618403)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (89392436..89431886)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene NADPH oxidase 4 Neighboring gene H3 histone pseudogene 34 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:89304186-89305004 Neighboring gene Sharpr-MPRA regulatory region 15382 Neighboring gene uncharacterized LOC124902843 Neighboring gene UBTF like 10 (pseudogene) Neighboring gene tripartite motif containing 77

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Comparative analysis of prostate-specific membrane antigen (PSMA) versus a prostate-specific membrane antigen-like gene. O'Keefe DS, et al. Prostate, 2004 Feb 1. PMID 14716746
  2. Mapping, genomic organization and promoter analysis of the human prostate-specific membrane antigen gene. O'Keefe DS, et al. Biochim Biophys Acta, 1998 Nov 26. PMID 9838072
  3. Detailed genetic mapping around a putative prostate-specific membrane antigen locus on human chromosome 11p11.2. Maraj BH, et al. Cytogenet Cell Genet, 1998. PMID 9691167
  4. Molecular evolution of the transferrin receptor/glutamate carboxypeptidase II family. Lambert LA, et al. J Mol Evol, 2007 Jan. PMID 17160644
  5. Molecular cloning of a complementary DNA encoding a prostate-specific membrane antigen. Israeli RS, et al. Cancer Res, 1993 Jan 15. PMID 8417812

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Phenotypes

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Find tests for this gene in the NIH Genetic Testing Registry (GTR)

Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Other Names

  • N-acetylated-alpha-linked-acidic dipeptidase
  • cell growth-inhibiting gene 26 protein
  • folate hydrolase 2
  • prostate-specific membrane antigen-like protein
  • putative N-acetylated-alpha-linked acidic dipeptidase
  • putative folate hydrolase 1B

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables dipeptidase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables metallocarboxypeptidase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in C-terminal protein deglutamylation IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in extracellular exosome HDA PubMed 
located_in plasma membrane TAS
Traceable Author Statement
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_175944.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AP003122

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    89659268..89698718
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    89578945..89618403
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_003258.2: Suppressed sequence

    Description
    NG_003258.2: This RefSeq was permanently suppressed because it is primarily UTR sequence.

  2. NM_001395847.1: Suppressed sequence

    Description
    NM_001395847.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.

  3. NM_153696.3: Suppressed sequence

    Description
    NM_153696.3: This RefSeq was removed because currently there is support for the transcript but not for the protein.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9HBA9.1 GenPept UniProtKB/Swiss-Prot:Q9HBA9

Gene LinkOut

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