U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC21392880 ABSCISIC ACID-INSENSITIVE 5-like protein 5 [ Morus notabilis ]

Gene ID: 21392880, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC21392880
Gene description
ABSCISIC ACID-INSENSITIVE 5-like protein 5
Locus tag
L484_009555
Gene type
protein coding
RefSeq status
MODEL
Organism
Morus notabilis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Moreae; Morus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC21392880 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM41409v2 (GCF_000414095.1) Unplaced Scaffold NW_010367946.1 (207947..213712, complement)

NW_010367946.1Genomic Context describing neighboring genes Neighboring gene trimethylguanosine synthase Neighboring gene THO complex subunit 5B Neighboring gene protein DCL homolog, chloroplastic Neighboring gene uncharacterized LOC21392882

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_010367946 Unplaced Scaffold Reference ASM41409v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ABSCISIC ACID-INSENSITIVE 5-like protein 5; bZIP transcription factor 46

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Morus notabilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41409v2

Genomic

  1. NW_010367946.1 Reference ASM41409v2

    Range
    207947..213712 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024175927.1 → XP_024031695.1  ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X1

    UniProtKB/TrEMBL
    W9SA09
    Conserved Domains (1) summary
    cd14707
    Location:336 → 390
    bZIP_plant_BZIP46; Basic leucine zipper (bZIP) domain of uncharaterized Plant BZIP transcription factors: a DNA-binding and dimerization domain

  2. XM_024175928.1 → XP_024031696.1  bZIP transcription factor 46 isoform X2

    Conserved Domains (1) summary
    cd14707
    Location:336 → 356
    bZIP_plant_BZIP46; Basic leucine zipper (bZIP) domain of uncharaterized Plant BZIP transcription factors: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases