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Gpr174 G protein-coupled receptor 174 [ Mus musculus (house mouse) ]

Gene ID: 213439, updated on 2-Nov-2024

Summary

Official Symbol
Gpr174provided by MGI
Official Full Name
G protein-coupled receptor 174provided by MGI
Primary source
MGI:MGI:2685222
See related
Ensembl:ENSMUSG00000073008 AllianceGenome:MGI:2685222
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm376; Lypsr3
Summary
Enables bioactive lipid receptor activity. Acts upstream of or within T cell homeostasis. Predicted to be located in centriolar satellite and intracellular membrane-bounded organelle. Predicted to be active in plasma membrane. Orthologous to human GPR174 (G protein-coupled receptor 174). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See Gpr174 in Genome Data Viewer
Location:
X D; X 47.48 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (106299484..106340377)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (107255878..107296771)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E11054 Neighboring gene STARR-positive B cell enhancer ABC_E11686 Neighboring gene purinergic receptor P2Y, G-protein coupled 10B Neighboring gene prohibitin pseudogene Neighboring gene STARR-positive B cell enhancer mm9_chrX:104413022-104413322 Neighboring gene STARR-positive B cell enhancer ABC_E7704 Neighboring gene alpha-enolase pseudogene Neighboring gene STARR-seq mESC enhancer starr_47743 Neighboring gene glutamate dehydrogenase 1 pseudogene Neighboring gene ribosomal protein L7a pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables G protein-coupled receptor activity ISO
Inferred from Sequence Orthology
more info
 
enables bioactive lipid receptor activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in centriolar satellite IEA
Inferred from Electronic Annotation
more info
 
located_in centriolar satellite ISO
Inferred from Sequence Orthology
more info
 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 
located_in intracellular membrane-bounded organelle ISO
Inferred from Sequence Orthology
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IC
Inferred by Curator
more info
PubMed 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
probable G-protein coupled receptor 174
Names
putative purinergic receptor FKSG79

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033251.5NP_001028423.1  probable G-protein coupled receptor 174

    See identical proteins and their annotated locations for NP_001028423.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3 and 4 encode the same protein. An upstream AUG is present that would result in a 13 aa N-terminal extension, but it has a weak Kozak signal and is absent in other mammals, whereas the annotated dAUG has a stronger Kozak signal and is well-conserved among mammals.
    Source sequence(s)
    AK153611, AL663081
    Consensus CDS
    CCDS30348.1
    UniProtKB/Swiss-Prot
    Q3U507
    Related
    ENSMUSP00000112974.2, ENSMUST00000120971.8
    Conserved Domains (1) summary
    cd15152
    Location:20303
    7tmA_GPR174-like; putative purinergic receptor GPR174, member of the class A family of seven-transmembrane G protein-coupled receptors
  2. NM_001177781.1NP_001171252.1  probable G-protein coupled receptor 174

    See identical proteins and their annotated locations for NP_001171252.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript. Variants 1, 2, 3 and 4 encode the same protein. An upstream AUG is present that would result in a 13 aa N-terminal extension, but it has a weak Kozak signal and is absent in other mammals, whereas the annotated dAUG has a stronger Kozak signal and is well-conserved among mammals.
    Source sequence(s)
    AL663081
    Consensus CDS
    CCDS30348.1
    UniProtKB/Swiss-Prot
    Q3U507
    Related
    ENSMUSP00000098852.3, ENSMUST00000101294.9
    Conserved Domains (1) summary
    cd15152
    Location:20303
    7tmA_GPR174-like; putative purinergic receptor GPR174, member of the class A family of seven-transmembrane G protein-coupled receptors
  3. NM_001177782.1NP_001171253.1  probable G-protein coupled receptor 174

    See identical proteins and their annotated locations for NP_001171253.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3 and 4 encode the same protein. An upstream AUG is present that would result in a 13 aa N-terminal extension, but it has a weak Kozak signal and is absent in other mammals, whereas the annotated dAUG has a stronger Kozak signal and is well-conserved among mammals.
    Source sequence(s)
    AL663081, BQ562837
    Consensus CDS
    CCDS30348.1
    UniProtKB/Swiss-Prot
    Q3U507
    Related
    ENSMUSP00000137372.2, ENSMUST00000178838.2
    Conserved Domains (1) summary
    cd15152
    Location:20303
    7tmA_GPR174-like; putative purinergic receptor GPR174, member of the class A family of seven-transmembrane G protein-coupled receptors
  4. NM_001358747.1NP_001345676.1  probable G-protein coupled receptor 174

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3 and 4 encode the same protein. An upstream AUG is present that would result in a 13 aa N-terminal extension, but it has a weak Kozak signal and is absent in other mammals, whereas the annotated dAUG has a stronger Kozak signal and is well-conserved among mammals.
    Source sequence(s)
    AL663081
    Consensus CDS
    CCDS30348.1
    UniProtKB/Swiss-Prot
    Q3U507
    Related
    ENSMUSP00000113032.2, ENSMUST00000118820.8
    Conserved Domains (1) summary
    cd15152
    Location:20303
    7tmA_GPR174-like; putative purinergic receptor GPR174, member of the class A family of seven-transmembrane G protein-coupled receptors

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    106299484..106340377
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017318457.2XP_017173946.1  probable G-protein coupled receptor 174 isoform X1

    Conserved Domains (1) summary
    cd15152
    Location:33316
    7tmA_GPR174-like; putative purinergic receptor GPR174, member of the class A family of seven-transmembrane G protein-coupled receptors