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Mylk3 myosin light chain kinase 3 [ Mus musculus (house mouse) ]

Gene ID: 213435, updated on 14-Nov-2024

Summary

Official Symbol
Mylk3provided by MGI
Official Full Name
myosin light chain kinase 3provided by MGI
Primary source
MGI:MGI:2443063
See related
Ensembl:ENSMUSG00000031698 AllianceGenome:MGI:2443063
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
MLCK; D830007F02Rik
Summary
Enables calcium/calmodulin-dependent protein kinase activity and myosin light chain kinase activity. Involved in protein phosphorylation and sarcomere organization. Located in cytoplasm. Colocalizes with actin cytoskeleton. Is expressed in heart atrium; heart ventricle; inner ear; and liver. Orthologous to human MYLK3 (myosin light chain kinase 3). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in heart adult (RPKM 54.9), liver E14 (RPKM 12.4) and 2 other tissues See more
Orthologs
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Genomic context

See Mylk3 in Genome Data Viewer
Location:
8 C3; 8 41.61 cM
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (86050933..86112969, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (85324928..85386340, complement)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E9120 Neighboring gene origin recognition complex, subunit 6 Neighboring gene predicted gene, 22336 Neighboring gene RIKEN cDNA 4921524J17 gene Neighboring gene STARR-positive B cell enhancer ABC_E3790 Neighboring gene STARR-positive B cell enhancer ABC_E11392 Neighboring gene predicted gene, 53446

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

General gene information

Markers

Clone Names

  • MGC169607

Gene Ontology Provided by MGI

Process Evidence Code Pubs
involved_in cardiac myofibril assembly IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cardiac myofibril assembly IEA
Inferred from Electronic Annotation
more info
 
involved_in cardiac myofibril assembly ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular response to interleukin-1 IEA
Inferred from Electronic Annotation
more info
 
involved_in cellular response to interleukin-1 ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of membrane permeability IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of sarcomere organization IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of sarcomere organization ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of tight junction disassembly IEA
Inferred from Electronic Annotation
more info
 
involved_in protein phosphorylation IDA
Inferred from Direct Assay
more info
PubMed 
involved_in regulation of vascular permeability involved in acute inflammatory response ISO
Inferred from Sequence Orthology
more info
 
involved_in sarcomere organization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in sarcomere organization IDA
Inferred from Direct Assay
more info
PubMed 
involved_in sarcomere organization ISO
Inferred from Sequence Orthology
more info
 
involved_in sarcomerogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in sarcomerogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
colocalizes_with actin cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
 
colocalizes_with actin cytoskeleton IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
myosin light chain kinase 3
Names
cardiac MLCK
cardiac-MyBP-C-associated Ca/CaM kinase
cardiac-specific myosin light chain kinase
putative myosin light chain kinase 3
NP_001284541.1
NP_780650.2
XP_006530888.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001297612.1NP_001284541.1  myosin light chain kinase 3 isoform 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate first exon compared to variant 1. The resulting isoform (2) has a shorter and distinct N-terminus compared to isoform 1.
    Source sequence(s)
    AK146683, AK165216, BB843262
    Consensus CDS
    CCDS80910.1
    UniProtKB/TrEMBL
    D3Z630
    Related
    ENSMUSP00000113389.2, ENSMUST00000122452.8
    Conserved Domains (2) summary
    smart00220
    Location:361613
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14192
    Location:353613
    STKc_MLCK3; Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 3
  2. NM_175441.5NP_780650.2  myosin light chain kinase 3 isoform 1

    See identical proteins and their annotated locations for NP_780650.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
    Source sequence(s)
    AC134854
    Consensus CDS
    CCDS40422.1
    UniProtKB/Swiss-Prot
    B0LY41, Q3UIZ8, Q3V3V0, Q8BWD1
    UniProtKB/TrEMBL
    B2RQL6
    Related
    ENSMUSP00000034133.8, ENSMUST00000034133.14
    Conserved Domains (2) summary
    smart00220
    Location:494746
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14192
    Location:486746
    STKc_MLCK3; Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    86050933..86112969 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006530825.4XP_006530888.1  myosin light chain kinase 3 isoform X1

    Conserved Domains (1) summary
    cd14192
    Location:326586
    STKc_MLCK3; Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 3