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Aurkc aurora kinase C [ Mus musculus (house mouse) ]

Gene ID: 20871, updated on 2-Nov-2024

Summary

Official Symbol
Aurkcprovided by MGI
Official Full Name
aurora kinase Cprovided by MGI
Primary source
MGI:MGI:1321119
See related
Ensembl:ENSMUSG00000070837 AllianceGenome:MGI:1321119
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AIE1; AIK3; IAK3; ARK-3; Stk13
Summary
Enables protein kinase activity. Acts upstream of or within protein autophosphorylation. Located in chromosome, centromeric region and meiotic spindle midzone. Is expressed in brain; gonad; heart; liver; and metanephros. Human ortholog(s) of this gene implicated in spermatogenic failure 5. Orthologous to human AURKC (aurora kinase C). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in testis adult (RPKM 2.8), ovary adult (RPKM 0.2) and 1 other tissue See more
Orthologs
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Genomic context

See Aurkc in Genome Data Viewer
Location:
7 A1; 7 4.06 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (6998346..7006090)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (6995347..7003091)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 29 Neighboring gene STARR-seq mESC enhancer starr_17992 Neighboring gene zinc finger, imprinted 3 Neighboring gene STARR-seq mESC enhancer starr_17994 Neighboring gene zinc finger protein 264 Neighboring gene STARR-seq mESC enhancer starr_17995 Neighboring gene STARR-seq mESC enhancer starr_17996 Neighboring gene STARR-seq mESC enhancer starr_17997 Neighboring gene STARR-seq mESC enhancer starr_17999 Neighboring gene platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, pseudogene 2 Neighboring gene STARR-seq mESC enhancer starr_18000 Neighboring gene ARP2 actin-related protein 2 homolog pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables histone H2AS1 kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein kinase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables protein kinase activity ISO
Inferred from Sequence Orthology
more info
 
enables protein kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables protein serine kinase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in cell division IEA
Inferred from Electronic Annotation
more info
 
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 
involved_in meiotic cell cycle IEA
Inferred from Electronic Annotation
more info
 
involved_in mitotic spindle organization IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within protein autophosphorylation IDA
Inferred from Direct Assay
more info
PubMed 
involved_in protein phosphorylation ISO
Inferred from Sequence Orthology
more info
 
involved_in protein phosphorylation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in regulation of cytokinesis IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in centrosome IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in chromosome IDA
Inferred from Direct Assay
more info
PubMed 
part_of chromosome passenger complex IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in chromosome, centromeric region IDA
Inferred from Direct Assay
more info
PubMed 
located_in condensed chromosome ISO
Inferred from Sequence Orthology
more info
 
located_in condensed chromosome ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
is_active_in kinetochore IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in meiotic spindle midzone IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in midbody IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in midbody ISO
Inferred from Sequence Orthology
more info
 
located_in midbody ISS
Inferred from Sequence or Structural Similarity
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
is_active_in spindle microtubule IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in spindle midzone IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in spindle midzone ISO
Inferred from Sequence Orthology
more info
 
located_in spindle midzone ISS
Inferred from Sequence or Structural Similarity
more info
 
is_active_in spindle pole IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
aurora kinase C
Names
aurora 3
aurora B
aurora-related kinase 3
aurora/IPL1-related kinase 3
aurora/Ipl1/Eg2 protein 1
serine/threonine kinase 13 (aurora/IPL-like)
serine/threonine-protein kinase 13
serine/threonine-protein kinase aurora-C
NP_001074434.2
NP_001074435.1
NP_065597.2
XP_006539760.1
XP_006539764.1
XP_017177568.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001080965.2NP_001074434.2  aurora kinase C

    Status: VALIDATED

    Source sequence(s)
    AC152418
    UniProtKB/Swiss-Prot
    O88445, Q6P209, Q9JLC2
    Related
    ENSMUSP00000083426.7, ENSMUST00000086248.8
  2. NM_001080966.2NP_001074435.1  aurora kinase C

    See identical proteins and their annotated locations for NP_001074435.1

    Status: VALIDATED

    Source sequence(s)
    AC152418
    Consensus CDS
    CCDS85211.1
    UniProtKB/Swiss-Prot
    O88445, Q6P209, Q9JLC2
    UniProtKB/TrEMBL
    Q497X5
    Related
    ENSMUSP00000146450.2, ENSMUST00000207711.2
    Conserved Domains (1) summary
    cl21453
    Location:9275
    PKc_like; Protein Kinases, catalytic domain
  3. NM_020572.3NP_065597.2  aurora kinase C

    See identical proteins and their annotated locations for NP_065597.2

    Status: VALIDATED

    Source sequence(s)
    AC152418
    Consensus CDS
    CCDS85211.1
    UniProtKB/Swiss-Prot
    O88445, Q6P209, Q9JLC2
    UniProtKB/TrEMBL
    Q497X5
    Related
    ENSMUSP00000147207.2, ENSMUST00000208049.2
    Conserved Domains (1) summary
    cl21453
    Location:9275
    PKc_like; Protein Kinases, catalytic domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    6998346..7006090
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017322079.1XP_017177568.1  aurora kinase C isoform X1

    UniProtKB/Swiss-Prot
    O88445, Q6P209, Q9JLC2
    UniProtKB/TrEMBL
    Q497X5
    Conserved Domains (1) summary
    cl21453
    Location:9275
    PKc_like; Protein Kinases, catalytic domain
  2. XM_006539697.3XP_006539760.1  aurora kinase C isoform X1

    See identical proteins and their annotated locations for XP_006539760.1

    UniProtKB/Swiss-Prot
    O88445, Q6P209, Q9JLC2
    UniProtKB/TrEMBL
    Q497X5
    Conserved Domains (1) summary
    cl21453
    Location:9275
    PKc_like; Protein Kinases, catalytic domain
  3. XM_006539701.3XP_006539764.1  aurora kinase C isoform X1

    See identical proteins and their annotated locations for XP_006539764.1

    UniProtKB/Swiss-Prot
    O88445, Q6P209, Q9JLC2
    UniProtKB/TrEMBL
    Q497X5
    Conserved Domains (1) summary
    cl21453
    Location:9275
    PKc_like; Protein Kinases, catalytic domain