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Serpini1 serine (or cysteine) peptidase inhibitor, clade I, member 1 [ Mus musculus (house mouse) ]

Gene ID: 20713, updated on 2-Nov-2024

Summary

Official Symbol
Serpini1provided by MGI
Official Full Name
serine (or cysteine) peptidase inhibitor, clade I, member 1provided by MGI
Primary source
MGI:MGI:1194506
See related
Ensembl:ENSMUSG00000027834 AllianceGenome:MGI:1194506
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ns; PI12; PI-12; Spi17
Summary
Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be involved in negative regulation of endopeptidase activity and positive regulation of neuron projection development. Located in neuronal cell body and secretory granule lumen. Is expressed in several structures, including enteric nervous system; genitourinary system; intestine; retina; and telencephalon. Used to study familial encephalopathy with neuroserpin inclusion bodies. Human ortholog(s) of this gene implicated in familial encephalopathy with neuroserpin inclusion bodies. Orthologous to human SERPINI1 (serpin family I member 1). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in frontal lobe adult (RPKM 50.2), cortex adult (RPKM 38.8) and 5 other tissues See more
Orthologs
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Genomic context

See Serpini1 in Genome Data Viewer
Location:
3 E3; 3 33.76 cM
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (75464800..75549830)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (75557493..75642523)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene WD repeat domain 49 Neighboring gene predicted gene, 17836 Neighboring gene programmed cell death 10 Neighboring gene STARR-positive B cell enhancer ABC_E2071 Neighboring gene STARR-seq mESC enhancer starr_07971 Neighboring gene pluripotency associated transcript 10 Neighboring gene predicted gene, 25846

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 
  • Targeted (1)  1 citation

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables serine-type endopeptidase inhibitor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables serine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 
enables serine-type endopeptidase inhibitor activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in cytoplasmic vesicle lumen ISO
Inferred from Sequence Orthology
more info
 
located_in extracellular space HDA PubMed 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
 
located_in neuronal cell body IDA
Inferred from Direct Assay
more info
PubMed 
located_in neuronal cell body ISO
Inferred from Sequence Orthology
more info
 
located_in perikaryon IEA
Inferred from Electronic Annotation
more info
 
located_in secretory granule lumen IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
neuroserpin
Names
peptidase inhibitor 12
protease inhibitor 17
serine protease inhibitor 17
serpin I1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001357514.1NP_001344443.1  neuroserpin isoform 2 precursor

    Status: VALIDATED

    Source sequence(s)
    AC140430
    Conserved Domains (1) summary
    cd02048
    Location:23409
    neuroserpin; Neuroserpin is a inhibitory member of the SERine Proteinase INhibitor (serpin) family that reacts preferentially with tissue-type plasminogen activator (tPA). It is located in neurons in regions of the brain where tPA is also found, suggesting that ...
  2. NM_009250.3NP_033276.1  neuroserpin isoform 1 precursor

    See identical proteins and their annotated locations for NP_033276.1

    Status: VALIDATED

    Source sequence(s)
    AC140430, AK032152
    Consensus CDS
    CCDS17415.1
    UniProtKB/Swiss-Prot
    O35684, Q543F7, Q922U6
    Related
    ENSMUSP00000029423.9, ENSMUST00000029423.9
    Conserved Domains (1) summary
    cd02048
    Location:23410
    neuroserpin; Neuroserpin is a inhibitory member of the SERine Proteinase INhibitor (serpin) family that reacts preferentially with tissue-type plasminogen activator (tPA). It is located in neurons in regions of the brain where tPA is also found, suggesting that ...

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    75464800..75549830
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)