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HETIRDRAFT_445896 molecular chaperone, DnaJ superfamily [ Heterobasidion irregulare TC 32-1 ]

Gene ID: 20675656, updated on 3-Jan-2024

Summary

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Gene symbol
HETIRDRAFT_445896
Gene description
molecular chaperone, DnaJ superfamily
Locus tag
HETIRDRAFT_445896
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Heterobasidion irregulare TC 32-1 (strain: TC 32-1, nat-host: Pinus resinosa)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Russulales; Bondarzewiaceae; Heterobasidion; Heterobasidion annosum species complex
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Genomic context

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See HETIRDRAFT_445896 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
6

NW_009258204.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009258204.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen. Olson Å, et al. New Phytol, 2012 Jun. PMID 22463738
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-folding chaperone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
molecular chaperone, DnaJ superfamily
XP_009549479.1
  • related to heat shock protein DnaJ [Plasmodium yoelii yoelii str. 17XNL]

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_009258204.1 Reference assembly

    Range
    1872210..1874008 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009551184.1 → XP_009549479.1  molecular chaperone, DnaJ superfamily [Heterobasidion irregulare TC 32-1]

    See identical proteins and their annotated locations for XP_009549479.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    W4K0A9
    Conserved Domains (2) summary
    COG0484
    Location:1 → 137
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
    pfam00226
    Location:4 → 72
    DnaJ; DnaJ domain
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases