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Slc16a7 solute carrier family 16 (monocarboxylic acid transporters), member 7 [ Mus musculus (house mouse) ]

Gene ID: 20503, updated on 2-Nov-2024

Summary

Official Symbol
Slc16a7provided by MGI
Official Full Name
solute carrier family 16 (monocarboxylic acid transporters), member 7provided by MGI
Primary source
MGI:MGI:1330284
See related
Ensembl:ENSMUSG00000020102 AllianceGenome:MGI:1330284
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Mct2; 4921534N07Rik; 9030411M13Rik; D630004K10Rik
Summary
Enables symporter activity. Predicted to be involved in plasma membrane lactate transport and pyruvate transmembrane transport. Predicted to be located in cytosol and nucleoplasm. Predicted to be active in several cellular components, including Schaffer collateral - CA1 synapse; basolateral plasma membrane; and hippocampal mossy fiber to CA3 synapse. Is expressed in several structures, including alimentary system; early conceptus; genitourinary system; integumental system; and nervous system. Orthologous to human SLC16A7 (solute carrier family 16 member 7). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in testis adult (RPKM 38.6), bladder adult (RPKM 5.2) and 5 other tissues See more
Orthologs
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Genomic context

See Slc16a7 in Genome Data Viewer
Location:
10 D3; 10 72.31 cM
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (125055139..125225455, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (125219270..125389586, complement)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_28154 Neighboring gene STARR-seq mESC enhancer starr_28155 Neighboring gene predicted gene, 36771 Neighboring gene predicted gene, 46205 Neighboring gene STARR-seq mESC enhancer starr_28157 Neighboring gene STARR-seq mESC enhancer starr_28158 Neighboring gene STARR-seq mESC enhancer starr_28160 Neighboring gene ribosomal protein L29 pseudogene Neighboring gene predicted gene, 40795

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 
  • Targeted (2)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • MGC143699, MGC143700, MGC143718

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables identical protein binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables lactate transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables lactate transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
enables lactate transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables pyruvate transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
enables pyruvate transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables symporter activity IDA
Inferred from Direct Assay
more info
PubMed 
enables symporter activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in lactate transmembrane transport ISO
Inferred from Sequence Orthology
more info
 
involved_in lactate transmembrane transport ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in plasma membrane lactate transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in plasma membrane lactate transport IEA
Inferred from Electronic Annotation
more info
 
involved_in plasma membrane lactate transport ISO
Inferred from Sequence Orthology
more info
 
involved_in pyruvate transmembrane transport ISO
Inferred from Sequence Orthology
more info
 
involved_in pyruvate transmembrane transport ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in Schaffer collateral - CA1 synapse IEA
Inferred from Electronic Annotation
more info
 
is_active_in Schaffer collateral - CA1 synapse ISO
Inferred from Sequence Orthology
more info
 
is_active_in basolateral plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in basolateral plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in glutamatergic synapse IEA
Inferred from Electronic Annotation
more info
 
is_active_in glutamatergic synapse ISO
Inferred from Sequence Orthology
more info
 
located_in hippocampal mossy fiber to CA3 synapse IEA
Inferred from Electronic Annotation
more info
 
is_active_in hippocampal mossy fiber to CA3 synapse ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in parallel fiber to Purkinje cell synapse IEA
Inferred from Electronic Annotation
more info
 
is_active_in parallel fiber to Purkinje cell synapse ISO
Inferred from Sequence Orthology
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in postsynaptic density membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in postsynaptic density membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
monocarboxylate transporter 2
Names
solute carrier family 16 member 7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001358496.2NP_001345425.1  monocarboxylate transporter 2

    Status: VALIDATED

    Source sequence(s)
    AC093478
    Consensus CDS
    CCDS24218.1
    UniProtKB/Swiss-Prot
    O70451
    UniProtKB/TrEMBL
    Q149G3, Q149G4, Q4FK61
    Related
    ENSMUSP00000147968.2, ENSMUST00000211781.2
    Conserved Domains (1) summary
    TIGR00892
    Location:5431
    2A0113; monocarboxylate transporter 1
  2. NM_001358915.2NP_001345844.1  monocarboxylate transporter 2

    Status: VALIDATED

    Source sequence(s)
    AC093478
    Consensus CDS
    CCDS24218.1
    UniProtKB/Swiss-Prot
    O70451
    UniProtKB/TrEMBL
    Q149G3, Q149G4, Q4FK61
    Related
    ENSMUSP00000100892.3, ENSMUST00000105257.4
    Conserved Domains (1) summary
    TIGR00892
    Location:5431
    2A0113; monocarboxylate transporter 1
  3. NM_001428806.1NP_001415735.1  monocarboxylate transporter 2

    Status: VALIDATED

    Source sequence(s)
    AC093478, AC153890
    UniProtKB/Swiss-Prot
    O70451
    UniProtKB/TrEMBL
    Q149G3
  4. NM_001428807.1NP_001415736.1  monocarboxylate transporter 2

    Status: VALIDATED

    Source sequence(s)
    AC093478, AC153890
    UniProtKB/Swiss-Prot
    O70451
    UniProtKB/TrEMBL
    Q149G3
  5. NM_001428808.1NP_001415737.1  monocarboxylate transporter 2

    Status: VALIDATED

    Source sequence(s)
    AC093478, AC153890
    UniProtKB/Swiss-Prot
    O70451
    UniProtKB/TrEMBL
    Q149G3
  6. NM_001428809.1NP_001415738.1  monocarboxylate transporter 2

    Status: VALIDATED

    Source sequence(s)
    AC093478, AC153890
    UniProtKB/Swiss-Prot
    O70451
    UniProtKB/TrEMBL
    Q149G3
  7. NM_011391.3NP_035521.1  monocarboxylate transporter 2

    See identical proteins and their annotated locations for NP_035521.1

    Status: VALIDATED

    Source sequence(s)
    AC093478
    Consensus CDS
    CCDS24218.1
    UniProtKB/Swiss-Prot
    O70451
    UniProtKB/TrEMBL
    Q149G3, Q149G4, Q4FK61
    Related
    ENSMUSP00000065433.3, ENSMUST00000063318.10
    Conserved Domains (1) summary
    TIGR00892
    Location:5431
    2A0113; monocarboxylate transporter 1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    125055139..125225455 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006513406.4XP_006513469.1  monocarboxylate transporter 2 isoform X1

    Conserved Domains (1) summary
    TIGR00892
    Location:5431
    2A0113; monocarboxylate transporter 1
  2. XM_030244968.2XP_030100828.1  monocarboxylate transporter 2 isoform X1

    Conserved Domains (1) summary
    TIGR00892
    Location:5431
    2A0113; monocarboxylate transporter 1
  3. XM_006513413.5XP_006513476.1  monocarboxylate transporter 2 isoform X1

    Conserved Domains (1) summary
    TIGR00892
    Location:5431
    2A0113; monocarboxylate transporter 1
  4. XM_006513409.5XP_006513472.1  monocarboxylate transporter 2 isoform X1

    Conserved Domains (1) summary
    TIGR00892
    Location:5431
    2A0113; monocarboxylate transporter 1
  5. XM_006513410.5XP_006513473.1  monocarboxylate transporter 2 isoform X1

    See identical proteins and their annotated locations for XP_006513473.1

    UniProtKB/Swiss-Prot
    O70451
    UniProtKB/TrEMBL
    Q149G3, Q149G4, Q4FK61
    Related
    ENSMUSP00000147560.2, ENSMUST00000210780.2
    Conserved Domains (1) summary
    TIGR00892
    Location:5431
    2A0113; monocarboxylate transporter 1
  6. XM_030244969.2XP_030100829.1  monocarboxylate transporter 2 isoform X1

    UniProtKB/Swiss-Prot
    O70451
    UniProtKB/TrEMBL
    Q149G3, Q149G4, Q4FK61
    Conserved Domains (1) summary
    TIGR00892
    Location:5431
    2A0113; monocarboxylate transporter 1
  7. XM_006513408.5XP_006513471.1  monocarboxylate transporter 2 isoform X1

    See identical proteins and their annotated locations for XP_006513471.1

    UniProtKB/Swiss-Prot
    O70451
    UniProtKB/TrEMBL
    Q149G3, Q149G4, Q4FK61
    Conserved Domains (1) summary
    TIGR00892
    Location:5431
    2A0113; monocarboxylate transporter 1
  8. XM_030244970.2XP_030100830.1  monocarboxylate transporter 2 isoform X1

    UniProtKB/Swiss-Prot
    O70451
    UniProtKB/TrEMBL
    Q149G3, Q149G4, Q4FK61
    Conserved Domains (1) summary
    TIGR00892
    Location:5431
    2A0113; monocarboxylate transporter 1
  9. XM_017313861.3XP_017169350.1  monocarboxylate transporter 2 isoform X1

    UniProtKB/Swiss-Prot
    O70451
    UniProtKB/TrEMBL
    Q149G3, Q149G4, Q4FK61
    Conserved Domains (1) summary
    TIGR00892
    Location:5431
    2A0113; monocarboxylate transporter 1