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PKS12 PKS12 [ Fusarium pseudograminearum CS3096 ]

Gene ID: 20362418, updated on 31-Jan-2024

Summary

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Gene symbol
PKS12
Gene description
PKS12
Locus tag
FPSE_03799
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Fusarium pseudograminearum CS3096 (strain: CS3096)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium
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Genomic context

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See PKS12 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Sequence:
Chromosome: 1; NC_031951.1 (7597727..7604206, complement)

Chromosome 1 - NC_031951.1Genomic Context describing neighboring genes Neighboring gene aurT Neighboring gene aurR2 Neighboring gene hypothetical protein Neighboring gene aurJ

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_031951.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative pathogenomics reveals horizontally acquired novel virulence genes in fungi infecting cereal hosts. Gardiner DM, et al. PLoS Pathog, 2012 Sep. PMID 23028337, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-oxoacyl-[acyl-carrier-protein] synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty acid synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PKS12

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_031951.1 Reference assembly

    Range
    7597727..7604206 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009256919.1 → XP_009255194.1  PKS12 [Fusarium pseudograminearum CS3096]

    See identical proteins and their annotated locations for XP_009255194.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    K3VM03
    Conserved Domains (7) summary
    smart00825
    Location:381 → 813
    PKS_KS; Beta-ketoacyl synthase
    smart00827
    Location:918 → 1218
    PKS_AT; Acyl transferase domain in polyketide synthase (PKS) enzymes
    cd00833
    Location:381 → 811
    PKS; polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or ...
    TIGR04532
    Location:1298 → 1616
    PT_fungal_PKS; iterative type I PKS product template domain
    pfam00550
    Location:1674 → 1735
    PP-binding; Phosphopantetheine attachment site
    pfam16073
    Location:9 → 246
    SAT; Starter unit:ACP transacylase in aflatoxin biosynthesis
    cl21494
    Location:1807 → 2054
    Abhydrolase; alpha/beta hydrolases
Nucleotide Protein
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