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Glg1 golgi apparatus protein 1 [ Mus musculus (house mouse) ]

Gene ID: 20340, updated on 2-Nov-2024

Summary

Official Symbol
Glg1provided by MGI
Official Full Name
golgi apparatus protein 1provided by MGI
Primary source
MGI:MGI:104967
See related
Ensembl:ENSMUSG00000003316 AllianceGenome:MGI:104967
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
CFR; CFR-1; ESL-1; MG160; Selel; MG-160
Summary
Predicted to enable fibroblast growth factor binding activity. Acts upstream of or within several processes, including negative regulation of protein processing; negative regulation of transforming growth factor beta receptor signaling pathway; and regulation of chondrocyte differentiation. Located in Golgi membrane and extracellular matrix. Is expressed in several structures, including cartilage condensation; central nervous system; genitourinary system; hemolymphoid system gland; and retina. Orthologous to human GLG1 (golgi glycoprotein 1). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in ovary adult (RPKM 30.7), adrenal adult (RPKM 22.9) and 28 other tissues See more
Orthologs
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Genomic context

See Glg1 in Genome Data Viewer
Location:
8 E1; 8 57.98 cM
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (111879916..111985842, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (111153284..111259210, complement)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene C-type lectin domain family 18, member A Neighboring gene pyruvate dehydrogenase phosphatase regulatory subunit Neighboring gene RIKEN cDNA 9430091E24 gene Neighboring gene STARR-seq mESC enhancer starr_22692 Neighboring gene STARR-positive B cell enhancer ABC_E708 Neighboring gene predicted gene, 53455 Neighboring gene ring finger and WD repeat domain 3 Neighboring gene STARR-seq mESC enhancer starr_22693 Neighboring gene ubiquitin-40S ribosomal protein S27a pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 
  • Gene trapped (3) 
  • Targeted (2)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables fibroblast growth factor binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables fibroblast growth factor binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in Golgi apparatus IDA
Inferred from Direct Assay
more info
PubMed 
located_in Golgi apparatus ISO
Inferred from Sequence Orthology
more info
 
located_in Golgi medial cisterna ISO
Inferred from Sequence Orthology
more info
 
is_active_in Golgi membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in Golgi membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular matrix IDA
Inferred from Direct Assay
more info
PubMed 
located_in microtubule organizing center IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Golgi apparatus protein 1
Names
E-selectin ligand 1
golgi sialoglycoprotein MG-160
selectin, endothelial cell, ligand

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001368315.1NP_001355244.1  Golgi apparatus protein 1 isoform 1 precursor

    Status: VALIDATED

    Source sequence(s)
    AC093451, AC163625
    UniProtKB/TrEMBL
    F8WHM5
  2. NM_009149.3NP_033175.1  Golgi apparatus protein 1 isoform 2 precursor

    See identical proteins and their annotated locations for NP_033175.1

    Status: VALIDATED

    Source sequence(s)
    AC093451, AC163625
    Consensus CDS
    CCDS22671.1
    UniProtKB/Swiss-Prot
    Q61543, Q9QZ40
    UniProtKB/TrEMBL
    F8WHM5, Q53WR6
    Related
    ENSMUSP00000131355.2, ENSMUST00000169020.8
    Conserved Domains (1) summary
    pfam00839
    Location:796852
    Cys_rich_FGFR; Cysteine rich repeat

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    111879916..111985842 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)