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AURANDRAFT_61626 hypothetical protein [ Aureococcus anophagefferens ]

Gene ID: 20223546, updated on 28-Dec-2023

Summary

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Gene symbol
AURANDRAFT_61626
Gene description
hypothetical protein
Locus tag
AURANDRAFT_61626
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Aureococcus anophagefferens (strain: CCMP1984)
Lineage
Eukaryota; Stramenopiles; Pelagophyceae; Pelagomonadales; Aureococcus
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Genomic context

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Location:
chromosome: Unknown
Exon count:
2

NW_008705563.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008705563.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics. Gobler CJ, et al. Proc Natl Acad Sci U S A, 2011 Mar 15. PMID 21368207, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_008705563.1 Reference assembly

    Range
    842255..844791
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009035404.1 → XP_009033652.1  hypothetical protein AURANDRAFT_61626 [Aureococcus anophagefferens]

    See identical proteins and their annotated locations for XP_009033652.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    F0Y0S6
    Conserved Domains (3) summary
    sd00006
    Location:190 → 223
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:569 → 741
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
    pfam13414
    Location:157 → 207
    TPR_11; TPR repeat
Nucleotide Protein
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