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PGK1 hypothetical protein [ Aureococcus anophagefferens ]

Gene ID: 20222676, updated on 28-Dec-2023

Summary

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Gene symbol
PGK1
Gene description
hypothetical protein
Locus tag
AURANDRAFT_58861
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Aureococcus anophagefferens (strain: CCMP1984)
Lineage
Eukaryota; Stramenopiles; Pelagophyceae; Pelagomonadales; Aureococcus
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Genomic context

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Location:
chromosome: Unknown
Exon count:
2

NW_008705565.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008705565.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics. Gobler CJ, et al. Proc Natl Acad Sci U S A, 2011 Mar 15. PMID 21368207, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphoglycerate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gluconeogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_009035101.1
  • phosphoglycerate kinase; expressed

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_008705565.1 Reference assembly

    Range
    2674143..2675612 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009036853.1 → XP_009035101.1  hypothetical protein AURANDRAFT_58861 [Aureococcus anophagefferens]

    See identical proteins and their annotated locations for XP_009035101.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    F0Y394
    Conserved Domains (1) summary
    pfam00162
    Location:36 → 417
    PGK; Phosphoglycerate kinase
Nucleotide Protein
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