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MDH1 hypothetical protein [ Aureococcus anophagefferens ]

Gene ID: 20221835, updated on 28-Dec-2023

Summary

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Gene symbol
MDH1
Gene description
hypothetical protein
Locus tag
AURANDRAFT_38103
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Aureococcus anophagefferens (strain: CCMP1984)
Lineage
Eukaryota; Stramenopiles; Pelagophyceae; Pelagomonadales; Aureococcus
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Genomic context

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Location:
chromosome: Unknown
Exon count:
1

NW_008705576.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008705576.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics. Gobler CJ, et al. Proc Natl Acad Sci U S A, 2011 Mar 15. PMID 21368207, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_009038898.1
  • malate dehydrogenase [Entamoeba histolytica HM-1:IMSS]; expressed

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_008705576.1 Reference assembly

    Range
    605584..606949
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009040650.1 → XP_009038898.1  hypothetical protein AURANDRAFT_38103 [Aureococcus anophagefferens]

    See identical proteins and their annotated locations for XP_009038898.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    F0YEV8
    Conserved Domains (2) summary
    PLN00105
    Location:79 → 430
    PLN00105; malate/L-lactate dehydrogenase; Provisional
    pfam02615
    Location:79 → 417
    Ldh_2; Malate/L-lactate dehydrogenase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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