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JO84_gp106 putative pectate lyase [ Aureococcus anophagefferens virus ]

Gene ID: 20041409, updated on 8-Jan-2023

Summary

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Gene symbol
JO84_gp106
Gene description
putative pectate lyase
Locus tag
JO84_gp106
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aureococcus anophagefferens virus (isolate: BtV-01, nat-host: Aureococcus anophagefferens)
Lineage
Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Megaviricetes; Algavirales; Phycodnaviridae
Old locus tag
AaV_375
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Genomic context

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Sequence:
NC_024697.1 (358656..359930)

NC_024697.1Genomic Context describing neighboring genes Neighboring gene putative UbiA prenyltransferase Neighboring gene hypothetical protein Neighboring gene putative zf-DHHC domain containing protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024697.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome of brown tide virus (AaV), the little giant of the Megaviridae, elucidates NCLDV genome expansion and host-virus coevolution. Moniruzzaman M, et al. Virology, 2014 Oct. PMID 25035289

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
putative pectate lyase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_024697.1 Reference assembly

    Range
    358656..359930
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009052443.1 putative pectate lyase [Aureococcus anophagefferens virus]

    See identical proteins and their annotated locations for YP_009052443.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A076FMJ8
    Conserved Domains (1) summary
    cl19188
    Location:4 → 301
    PL-6; Polysaccharide Lyase Family 6
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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