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Slc22a8 solute carrier family 22 (organic anion transporter), member 8 [ Mus musculus (house mouse) ]

Gene ID: 19879, updated on 2-Nov-2024

Summary

Official Symbol
Slc22a8provided by MGI
Official Full Name
solute carrier family 22 (organic anion transporter), member 8provided by MGI
Primary source
MGI:MGI:1336187
See related
Ensembl:ENSMUSG00000063796 AllianceGenome:MGI:1336187
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Oat3; Roct
Summary
Enables antiporter activity and organic anion transmembrane transporter activity. Predicted to be involved in glutathione transport; prostaglandin transport; and quaternary ammonium group transport. Predicted to be located in apical plasma membrane and basolateral plasma membrane. Is expressed in several structures, including central nervous system; genitourinary system; liver; spleen; and thyroid gland. Orthologous to human SLC22A8 (solute carrier family 22 member 8). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Restricted expression toward kidney adult (RPKM 202.2) See more
Orthologs
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Genomic context

See Slc22a8 in Genome Data Viewer
Location:
19 A; 19 5.44 cM
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (8568576..8589199)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (8591254..8611835)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 57666 Neighboring gene solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5 pseudogene Neighboring gene predicted gene, 36394 Neighboring gene solute carrier family 22 (organic anion transporter), member 6 Neighboring gene RIKEN cDNA 9830166K06 gene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 
  • Targeted (3)  1 citation

General gene information

Markers

Gene Ontology Provided by MGI

Process Evidence Code Pubs
involved_in glutathione transport ISO
Inferred from Sequence Orthology
more info
 
involved_in inorganic anion transport IEA
Inferred from Electronic Annotation
more info
 
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 
involved_in prostaglandin transport ISO
Inferred from Sequence Orthology
more info
 
involved_in prostaglandin transport ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in quaternary ammonium group transport ISO
Inferred from Sequence Orthology
more info
 
involved_in response to toxic substance IEA
Inferred from Electronic Annotation
more info
 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in xenobiotic transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in apical plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in basolateral plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in basolateral plasma membrane TAS
Traceable Author Statement
more info
 

General protein information

Preferred Names
organic anion transporter 3
Names
organic anion/dicarboxylate exchanger
reduced in osteosclerosis transporter
solute carrier family 22, member 8

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001164634.2NP_001158106.1  organic anion transporter 3 isoform 1

    See identical proteins and their annotated locations for NP_001158106.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 3 encode the same protein.
    Source sequence(s)
    AC025794, AC125136
    Consensus CDS
    CCDS29537.1
    UniProtKB/Swiss-Prot
    O88909, Q3TZF9, Q8CCX3, Q8CFH5, Q91WJ9
    Related
    ENSMUSP00000131045.2, ENSMUST00000170817.2
    Conserved Domains (1) summary
    TIGR00898
    Location:11503
    2A0119; cation transport protein
  2. NM_001164635.2NP_001158107.1  organic anion transporter 3 isoform 1

    See identical proteins and their annotated locations for NP_001158107.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 3 encode the same protein.
    Source sequence(s)
    AC025794, AC125136
    Consensus CDS
    CCDS29537.1
    UniProtKB/Swiss-Prot
    O88909, Q3TZF9, Q8CCX3, Q8CFH5, Q91WJ9
    Conserved Domains (1) summary
    TIGR00898
    Location:11503
    2A0119; cation transport protein
  3. NM_001411470.1NP_001398399.1  organic anion transporter 3 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC025794, AC125136
    UniProtKB/Swiss-Prot
    O88909, Q3TZF9, Q8CCX3, Q8CFH5, Q91WJ9
  4. NM_001411471.1NP_001398400.1  organic anion transporter 3 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC025794, AC125136
  5. NM_001411472.1NP_001398401.1  organic anion transporter 3 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC025794, AC125136
  6. NM_001411473.1NP_001398402.1  organic anion transporter 3 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC025794, AC125136
  7. NM_031194.6NP_112471.3  organic anion transporter 3 isoform 1

    See identical proteins and their annotated locations for NP_112471.3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript. Variants 1, 2 and 3 encode the same protein.
    Source sequence(s)
    AC025794, AC125136
    Consensus CDS
    CCDS29537.1
    UniProtKB/Swiss-Prot
    O88909, Q3TZF9, Q8CCX3, Q8CFH5, Q91WJ9
    Related
    ENSMUSP00000010251.4, ENSMUST00000010251.11
    Conserved Domains (1) summary
    TIGR00898
    Location:11503
    2A0119; cation transport protein

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    8568576..8589199
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004940127.1 RNA Sequence