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GLAREA_11461 Nucleotide-diphospho-sugar transferase [ Glarea lozoyensis ATCC 20868 ]

Gene ID: 19470502, updated on 6-Jan-2024

Summary

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Gene symbol
GLAREA_11461
Gene description
Nucleotide-diphospho-sugar transferase
Locus tag
GLAREA_11461
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Glarea lozoyensis ATCC 20868 (strain: ATCC 20868, culture-collection: ATCC:20868, type-material: culture from holotype of Glarea lozoyensis)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Helotiaceae; Glarea
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Genomic context

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See GLAREA_11461 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_007361003.1Genomic Context describing neighboring genes Neighboring gene FAD/NAD(P)-binding protein Neighboring gene uncharacterized protein Neighboring gene beta-lactamase/transpeptidase-like protein Neighboring gene FAD-linked oxidoreductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007361003.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomics-driven discovery of the pneumocandin biosynthetic gene cluster in the fungus Glarea lozoyensis. Chen L, et al. BMC Genomics, 2013 May 20. PMID 23688303, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall mannoprotein biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Nucleotide-diphospho-sugar transferase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_007361003.1 Reference assembly

    Range
    258182..259323
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008089604.1 → XP_008087795.1  Nucleotide-diphospho-sugar transferase [Glarea lozoyensis ATCC 20868]

    See identical proteins and their annotated locations for XP_008087795.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    S3CG55
    Conserved Domains (1) summary
    COG5020
    Location:18 → 343
    KTR1; Mannosyltransferase [Carbohydrate transport and metabolism]
Nucleotide Protein
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