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GLAREA_09313 (Trans)glycosidase [ Glarea lozoyensis ATCC 20868 ]

Gene ID: 19468361, updated on 6-Jan-2024

Summary

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Gene symbol
GLAREA_09313
Gene description
(Trans)glycosidase
Locus tag
GLAREA_09313
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Glarea lozoyensis ATCC 20868 (strain: ATCC 20868, culture-collection: ATCC:20868, type-material: culture from holotype of Glarea lozoyensis)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Helotiaceae; Glarea
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Genomic context

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See GLAREA_09313 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_007360983.1Genomic Context describing neighboring genes Neighboring gene Zn2/Cys6 DNA-binding protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007360983.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomics-driven discovery of the pneumocandin biosynthetic gene cluster in the fungus Glarea lozoyensis. Chen L, et al. BMC Genomics, 2013 May 20. PMID 23688303, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-glucanosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fungal-type cell wall (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in fungal-type cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
(Trans)glycosidase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_007360983.1 Reference assembly

    Range
    2018623..2020709
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008078274.1 → XP_008076465.1  (Trans)glycosidase [Glarea lozoyensis ATCC 20868]

    See identical proteins and their annotated locations for XP_008076465.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    H0EYG7, S3DHI3
    Conserved Domains (1) summary
    cl23725
    Location:16 → 326
    Glyco_hydro_1; Glycosyl hydrolase family 1
Nucleotide Protein
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