U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GLAREA_07348 (Trans)glycosidase [ Glarea lozoyensis ATCC 20868 ]

Gene ID: 19466401, updated on 6-Jan-2024

Summary

Go to the top of the page Help
Gene symbol
GLAREA_07348
Gene description
(Trans)glycosidase
Locus tag
GLAREA_07348
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Glarea lozoyensis ATCC 20868 (strain: ATCC 20868, culture-collection: ATCC:20868, type-material: culture from holotype of Glarea lozoyensis)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Helotiaceae; Glarea
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See GLAREA_07348 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_007360990.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene NAD(P)-binding Rossmann-fold containing protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_007360990.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genomics-driven discovery of the pneumocandin biosynthetic gene cluster in the fungus Glarea lozoyensis. Chen L, et al. BMC Genomics, 2013 May 20. PMID 23688303, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-glucanosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fungal-type cell wall (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in fungal-type cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
(Trans)glycosidase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_007360990.1 Reference assembly

    Range
    202172..203578 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008082036.1 → XP_008080227.1  (Trans)glycosidase [Glarea lozoyensis ATCC 20868]

    See identical proteins and their annotated locations for XP_008080227.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    H0EWK3, S3D338
    Conserved Domains (1) summary
    cl23725
    Location:15 → 335
    Glyco_hydro_1; Glycosyl hydrolase family 1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases