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GLAREA_05505 Nucleotide-diphospho-sugar transferase [ Glarea lozoyensis ATCC 20868 ]

Gene ID: 19464559, updated on 6-Jan-2024

Summary

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Gene symbol
GLAREA_05505
Gene description
Nucleotide-diphospho-sugar transferase
Locus tag
GLAREA_05505
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Glarea lozoyensis ATCC 20868 (strain: ATCC 20868, culture-collection: ATCC:20868, type-material: culture from holotype of Glarea lozoyensis)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Helotiaceae; Glarea
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Genomic context

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See GLAREA_05505 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
6

NW_007360984.1Genomic Context describing neighboring genes Neighboring gene Metalloproteases (zincins), catalytic Neighboring gene RING/U-box Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007360984.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomics-driven discovery of the pneumocandin biosynthetic gene cluster in the fungus Glarea lozoyensis. Chen L, et al. BMC Genomics, 2013 May 20. PMID 23688303, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Nucleotide-diphospho-sugar transferase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_007360984.1 Reference assembly

    Range
    1447377..1449777 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008078794.1 → XP_008076985.1  Nucleotide-diphospho-sugar transferase [Glarea lozoyensis ATCC 20868]

    See identical proteins and their annotated locations for XP_008076985.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    S3DCM7
    Conserved Domains (2) summary
    cd02537
    Location:38 → 268
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
    COG1442
    Location:106 → 241
    RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Nucleotide Protein
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