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GLAREA_02836 Nucleotide-diphospho-sugar transferase [ Glarea lozoyensis ATCC 20868 ]

Gene ID: 19461892, updated on 6-Jan-2024

Summary

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Gene symbol
GLAREA_02836
Gene description
Nucleotide-diphospho-sugar transferase
Locus tag
GLAREA_02836
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Glarea lozoyensis ATCC 20868 (strain: ATCC 20868, culture-collection: ATCC:20868, type-material: culture from holotype of Glarea lozoyensis)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Helotiaceae; Glarea
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Genomic context

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See GLAREA_02836 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_007361001.1Genomic Context describing neighboring genes Neighboring gene HAD-like protein Neighboring gene uncharacterized protein Neighboring gene MFS general substrate transporter Neighboring gene NAD(P)-linked oxidoreductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007361001.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomics-driven discovery of the pneumocandin biosynthetic gene cluster in the fungus Glarea lozoyensis. Chen L, et al. BMC Genomics, 2013 May 20. PMID 23688303, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall mannoprotein biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Nucleotide-diphospho-sugar transferase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_007361001.1 Reference assembly

    Range
    1563986..1565292
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008087921.1 → XP_008086112.1  Nucleotide-diphospho-sugar transferase [Glarea lozoyensis ATCC 20868]

    See identical proteins and their annotated locations for XP_008086112.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    H0EL81, S3CK83
    Conserved Domains (1) summary
    COG5020
    Location:7 → 394
    KTR1; Mannosyltransferase [Carbohydrate transport and metabolism]
Nucleotide Protein
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