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GLAREA_02002 uncharacterized protein [ Glarea lozoyensis ATCC 20868 ]

Gene ID: 19461060, updated on 6-Jan-2024

Summary

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Gene symbol
GLAREA_02002
Gene description
uncharacterized protein
Locus tag
GLAREA_02002
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Glarea lozoyensis ATCC 20868 (strain: ATCC 20868, culture-collection: ATCC:20868, type-material: culture from holotype of Glarea lozoyensis)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Helotiaceae; Glarea
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Genomic context

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See GLAREA_02002 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_007361002.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene FYVE/PHD zinc finger Neighboring gene WD40 repeat-like protein Neighboring gene RING/U-box

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007361002.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomics-driven discovery of the pneumocandin biosynthetic gene cluster in the fungus Glarea lozoyensis. Chen L, et al. BMC Genomics, 2013 May 20. PMID 23688303, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_008087409.1
  • GLAREA_02002

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_007361002.1 Reference assembly

    Range
    2537241..2538685 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008089218.1 → XP_008087409.1  uncharacterized protein GLAREA_02002 [Glarea lozoyensis ATCC 20868]

    See identical proteins and their annotated locations for XP_008087409.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    S3CJW1
    Conserved Domains (1) summary
    cd06855
    Location:57 → 370
    GT_GPT_euk; UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol. The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is ...
Nucleotide Protein
Heading Accession and Version

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