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GLAREA_01902 uncharacterized protein [ Glarea lozoyensis ATCC 20868 ]

Gene ID: 19460960, updated on 6-Jan-2024

Summary

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Gene symbol
GLAREA_01902
Gene description
uncharacterized protein
Locus tag
GLAREA_01902
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Glarea lozoyensis ATCC 20868 (strain: ATCC 20868, culture-collection: ATCC:20868, type-material: culture from holotype of Glarea lozoyensis)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Helotiaceae; Glarea
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Genomic context

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See GLAREA_01902 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_007361002.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene PLP-dependent transferase Neighboring gene (Trans)glycosidase Neighboring gene GTPase activation, GAP

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007361002.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomics-driven discovery of the pneumocandin biosynthetic gene cluster in the fungus Glarea lozoyensis. Chen L, et al. BMC Genomics, 2013 May 20. PMID 23688303, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fungal-type cell wall polysaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_008087309.1
  • GLAREA_01902

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_007361002.1 Reference assembly

    Range
    2254029..2259949 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008089118.1 → XP_008087309.1  uncharacterized protein GLAREA_01902 [Glarea lozoyensis ATCC 20868]

    See identical proteins and their annotated locations for XP_008087309.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    S3CJL3
    Conserved Domains (3) summary
    pfam02364
    Location:869 → 1693
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam14288
    Location:362 → 470
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
    cl23782
    Location:21 → 117
    RCR; Chitin synthesis regulation, resistance to Congo red
Nucleotide Protein
Heading Accession and Version

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