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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001305003.1 → NP_001291932.1 ras-related protein Rab-5C isoform 2
See identical proteins and their annotated locations for NP_001291932.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in the penultimate exon, compared to variant 1. It encodes isoform 2 which is longer than isoform 1.
- Source sequence(s)
-
AK159832, AL591469, BE447216, BY081527
- Consensus CDS
-
CCDS79048.1
- UniProtKB/TrEMBL
- Q3TCT9, Q8C266
- Related
- ENSMUSP00000019317.6, ENSMUST00000019317.12
- Conserved Domains (2) summary
-
- cd01860
Location:21 → 201
- Rab5_related; Rab-related GTPase family includes Rab5 and Rab22; regulates early endosome fusion
- pfam00071
Location:23 → 202
- Ras; Ras family
-
NM_024456.5 → NP_077776.2 ras-related protein Rab-5C isoform 1
See identical proteins and their annotated locations for NP_077776.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the shorter transcript and encodes the shorter isoform (1).
- Source sequence(s)
-
AK159832, AL591469, BE447216, BY081527
- Consensus CDS
-
CCDS36333.1
- UniProtKB/Swiss-Prot
- P35278, Q8R1V8, Q8R2N8
- UniProtKB/TrEMBL
- Q3TCT9, Q3TJ39
- Related
- ENSMUSP00000102987.2, ENSMUST00000107364.8
- Conserved Domains (1) summary
-
- cd01860
Location:21 → 183
- Rab5_related; Rab-related GTPase family includes Rab5 and Rab22; regulates early endosome fusion
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000077.7 Reference GRCm39 C57BL/6J
- Range
-
100605829..100629041 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_036156453.1 → XP_036012346.1 ras-related protein Rab-5C isoform X2
- UniProtKB/TrEMBL
-
Q3TCT9
- Conserved Domains (1) summary
-
- cd01860
Location:67 → 229
- Rab5_related; Rab-related GTPase family includes Rab5 and Rab22; regulates early endosome fusion
-
XM_036156452.1 → XP_036012345.1 ras-related protein Rab-5C isoform X1
- Conserved Domains (1) summary
-
- cd01860
Location:67 → 247
- Rab5_related; Rab-related GTPase family includes Rab5 and Rab22; regulates early endosome fusion
-
XM_036156454.1 → XP_036012347.1 ras-related protein Rab-5C isoform X3
- UniProtKB/Swiss-Prot
- P35278, Q8R1V8, Q8R2N8
- UniProtKB/TrEMBL
- Q3TCT9, Q3TJ39
- Conserved Domains (1) summary
-
- cd01860
Location:21 → 183
- Rab5_related; Rab-related GTPase family includes Rab5 and Rab22; regulates early endosome fusion