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MYCFIDRAFT_44346 glycoside hydrolase family 13 glycosyltransferase family 5 protein [ Pseudocercospora fijiensis CIRAD86 ]

Gene ID: 19339586, updated on 17-May-2024

Summary

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Gene symbol
MYCFIDRAFT_44346
Gene description
glycoside hydrolase family 13 glycosyltransferase family 5 protein
Locus tag
MYCFIDRAFT_44346
See related
FungiDB:MYCFIDRAFT_44346; VEuPathDB:MYCFIDRAFT_44346
Gene type
protein coding
RNA name
glycoside hydrolase family 13 glycosyltransferase family 5 protein
RefSeq status
PROVISIONAL
Organism
Pseudocercospora fijiensis CIRAD86 (strain: CIRAD86, culture-collection: CBS:120258)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Dothideomycetidae; Mycosphaerellales; Mycosphaerellaceae; Pseudocercospora
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Genomic context

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See MYCFIDRAFT_44346 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
6

NW_006921534.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006921534.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Diverse lifestyles and strategies of plant pathogenesis encoded in the genomes of eighteen Dothideomycetes fungi. Ohm RA, et al. PLoS Pathog, 2012. PMID 23236275, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,3-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fungal-type cell wall (1->3)-alpha-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in fungal-type cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoside hydrolase family 13 glycosyltransferase family 5 protein
XP_007924255.1
  • CAZy_ID 244169

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006921534.1 Reference assembly

    Range
    188034..195498 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007926064.1 → XP_007924255.1  glycoside hydrolase family 13 glycosyltransferase family 5 protein [Pseudocercospora fijiensis CIRAD86]

    See identical proteins and their annotated locations for XP_007924255.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    M3B2Y2
    Conserved Domains (3) summary
    cd11323
    Location:15 → 575
    AmyAc_AGS; Alpha amylase catalytic domain found in Alpha 1,3-glucan synthase (also called uridine diphosphoglucose-1,3-alpha-glucan glucosyltransferase and 1,3-alpha-D-glucan synthase)
    COG0297
    Location:1958 → 2375
    GlgA; Glycogen synthase [Carbohydrate transport and metabolism]
    cd03791
    Location:1194 → 1649
    GT5_Glycogen_synthase_DULL1-like; Glycogen synthase GlgA and similar proteins
Protein Accession Links
GenPept Link UniProtKB Link
EME83737.1

Gene LinkOut

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Molecular Biology Databases