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MYCFIDRAFT_202619 glycoside hydrolase family 72 protein [ Pseudocercospora fijiensis CIRAD86 ]

Gene ID: 19336053, updated on 17-May-2024

Summary

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Gene symbol
MYCFIDRAFT_202619
Gene description
glycoside hydrolase family 72 protein
Locus tag
MYCFIDRAFT_202619
See related
FungiDB:MYCFIDRAFT_202619; VEuPathDB:MYCFIDRAFT_202619
Gene type
protein coding
RNA name
glycoside hydrolase family 72 protein
RefSeq status
PROVISIONAL
Organism
Pseudocercospora fijiensis CIRAD86 (strain: CIRAD86, culture-collection: CBS:120258)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Dothideomycetidae; Mycosphaerellales; Mycosphaerellaceae; Pseudocercospora
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Genomic context

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See MYCFIDRAFT_202619 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_006921533.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006921533.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Diverse lifestyles and strategies of plant pathogenesis encoded in the genomes of eighteen Dothideomycetes fungi. Ohm RA, et al. PLoS Pathog, 2012. PMID 23236275, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-glucanosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fungal-type cell wall (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in fungal-type cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoside hydrolase family 72 protein
XP_007923891.1
  • CAZy_ID 244337

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006921533.1 Reference assembly

    Range
    6346805..6349810 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007925700.1 → XP_007923891.1  glycoside hydrolase family 72 protein [Pseudocercospora fijiensis CIRAD86]

    See identical proteins and their annotated locations for XP_007923891.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    M3BBQ1
    Conserved Domains (1) summary
    cl23725
    Location:42 → 350
    Glyco_hydro; Glycosyl hydrolases
Protein Accession Links
GenPept Link UniProtKB Link
EME86712.1

Gene LinkOut

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Molecular Biology Databases