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UCRPA7_1887 putative chitin synthase 3 protein [ Phaeoacremonium minimum UCRPA7 ]

Gene ID: 19322082, updated on 26-Jun-2024

Summary

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Gene symbol
UCRPA7_1887
Gene description
putative chitin synthase 3 protein
Locus tag
UCRPA7_1887
Gene type
protein coding
RNA name
putative chitin synthase 3 protein
RefSeq status
PROVISIONAL
Organism
Phaeoacremonium minimum UCRPA7 (strain: UCRPA7, nat-host: Vitis vinifera cv. Thompson)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Togniniales; Togniniaceae; Phaeoacremonium
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Genomic context

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See UCRPA7_1887 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_006921046.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene putative homoserine kinase protein Neighboring gene putative snare docking complex subunit protein Neighboring gene putative c-x8-c-x5-c-x3-h type zinc finger protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006921046.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Draft Genome Sequence of the Ascomycete Phaeoacremonium aleophilum Strain UCR-PA7, a Causal Agent of the Esca Disease Complex in Grapevines. Blanco-Ulate B, et al. Genome Announc, 2013 Jun 27. PMID 23814032, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
putative chitin synthase 3 protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006921046.1 Reference assembly

    Range
    83151..85788
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007914466.1 → XP_007912657.1  putative chitin synthase 3 protein [Phaeoacremonium minimum UCRPA7]

    See identical proteins and their annotated locations for XP_007912657.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    R8BTF4
    Conserved Domains (4) summary
    COG1215
    Location:259 → 599
    BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]
    pfam01644
    Location:150 → 311
    Chitin_synth_1; Chitin synthase
    pfam08407
    Location:78 → 148
    Chitin_synth_1N; Chitin synthase N-terminal
    cl11394
    Location:291 → 513
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
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