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PFL1_04843 uncharacterized protein [ Pseudozyma flocculosa PF-1 ]

Gene ID: 19318943, updated on 26-Jun-2024

Summary

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Gene symbol
PFL1_04843
Gene description
uncharacterized protein
Locus tag
PFL1_04843
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudozyma flocculosa PF-1 (strain: PF-1)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Pseudozyma
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Genomic context

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See PFL1_04843 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
6

NW_006920884.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006920884.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transition from a phytopathogenic smut ancestor to an anamorphic biocontrol agent deciphered by comparative whole-genome analysis. Lefebvre F, et al. Plant Cell, 2013 Jun. PMID 23800965, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_007880562.1
  • probable chitin synthase 1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006920884.1 Reference assembly

    Range
    498514..502126 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007882371.1 → XP_007880562.1  uncharacterized protein PFL1_04843 [Pseudozyma flocculosa PF-1]

    See identical proteins and their annotated locations for XP_007880562.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A061H6R6, A0A5C3F3Z8
    Conserved Domains (5) summary
    COG1215
    Location:332 → 709
    BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]
    pfam01644
    Location:234 → 405
    Chitin_synth_1; Chitin synthase
    pfam08407
    Location:157 → 232
    Chitin_synth_1N; Chitin synthase N-terminal
    cl11394
    Location:385 → 614
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
    cl21495
    Location:549 → 766
    DUF418; Protein of unknown function (DUF418)
Nucleotide Protein
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