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PFICI_11948 Delta-1-pyrroline-5-carboxylate dehydrogenase [ Pestalotiopsis fici W106-1 ]

Gene ID: 19276961, updated on 6-Jan-2024

Summary

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Gene symbol
PFICI_11948
Gene description
Delta-1-pyrroline-5-carboxylate dehydrogenase
Locus tag
PFICI_11948
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pestalotiopsis fici W106-1 (strain: W106-1, nat-host: Camellia sinensis)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Xylariomycetidae; Xylariales; Sporocadaceae; Pestalotiopsis
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Genomic context

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See PFICI_11948 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_006917099.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006917099.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-pyrroline-5-carboxylate dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proline catabolic process to glutamate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Delta-1-pyrroline-5-carboxylate dehydrogenase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006917099.1 Reference assembly

    Range
    1764006..1765820
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007840529.1 → XP_007838720.1  Delta-1-pyrroline-5-carboxylate dehydrogenase [Pestalotiopsis fici W106-1]

    See identical proteins and their annotated locations for XP_007838720.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    W3WUL8
    Conserved Domains (2) summary
    PLN02466
    Location:2 → 528
    PLN02466; aldehyde dehydrogenase family 2 member
    cl11961
    Location:13 → 532
    ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily
Nucleotide Protein
Heading Accession and Version

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