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Ptgis prostaglandin I2 (prostacyclin) synthase [ Mus musculus (house mouse) ]

Gene ID: 19223, updated on 2-Nov-2024

Summary

Official Symbol
Ptgisprovided by MGI
Official Full Name
prostaglandin I2 (prostacyclin) synthaseprovided by MGI
Primary source
MGI:MGI:1097156
See related
Ensembl:ENSMUSG00000017969 AllianceGenome:MGI:1097156
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Cyp8; Pgis; Cyp8a1
Summary
Predicted to enable heme binding activity and prostaglandin-I synthase activity. Acts upstream of or within decidualization and embryo implantation. Located in cytoplasm and nucleus. Is expressed in several structures, including alimentary system; brain; ear; early embryo; and genitourinary system. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); cerebrovascular disease (multiple); colorectal adenoma; limb ischemia; and primary pulmonary hypertension. Orthologous to human PTGIS (prostaglandin I2 synthase). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Broad expression in lung adult (RPKM 56.6), ovary adult (RPKM 52.9) and 16 other tissues See more
Orthologs
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Genomic context

See Ptgis in Genome Data Viewer
Location:
2 H3; 2 87.22 cM
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (167045114..167095069, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (167203194..167252150, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene potassium voltage gated channel, Shab-related subfamily, member 1 Neighboring gene predicted gene, 52568 Neighboring gene RIKEN cDNA 1110018N20 gene Neighboring gene predicted gene, 52569 Neighboring gene UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 Neighboring gene STARR-positive B cell enhancer ABC_E2061 Neighboring gene STARR-positive B cell enhancer ABC_E7887 Neighboring gene STARR-positive B cell enhancer ABC_E419 Neighboring gene STARR-positive B cell enhancer mm9_chr2:167200540-167200841 Neighboring gene STARR-positive B cell enhancer ABC_E4522 Neighboring gene STARR-seq mESC enhancer starr_06429 Neighboring gene STARR-positive B cell enhancer ABC_E7888 Neighboring gene STARR-seq mESC enhancer starr_06433 Neighboring gene solute carrier family 9 (sodium/hydrogen exchanger), member 8

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (5) 
  • Gene trapped (1) 
  • Targeted (1)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables heme binding ISO
Inferred from Sequence Orthology
more info
 
enables heme binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables hydroperoxy icosatetraenoate dehydratase activity IEA
Inferred from Electronic Annotation
more info
 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 
enables prostaglandin-I synthase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables prostaglandin-I synthase activity ISO
Inferred from Sequence Orthology
more info
 
enables prostaglandin-I synthase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in apoptotic signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular response to hypoxia ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular response to hypoxia ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in cellular response to interleukin-1 ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in cellular response to interleukin-6 ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within decidualization IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within embryo implantation IDA
Inferred from Direct Assay
more info
PubMed 
involved_in icosanoid metabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in icosanoid metabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in negative regulation of NF-kappaB transcription factor activity ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of NF-kappaB transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in negative regulation of cell population proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of inflammatory response ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of inflammatory response ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in negative regulation of nitric oxide biosynthetic process ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of nitric oxide biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in negative regulation of protein phosphorylation ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of smooth muscle cell proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of angiogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of angiogenesis ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of execution phase of apoptosis ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of execution phase of apoptosis ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of gene expression ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of peroxisome proliferator activated receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of peroxisome proliferator activated receptor signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in prostaglandin biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in prostaglandin biosynthetic process ISO
Inferred from Sequence Orthology
more info
 
involved_in prostaglandin biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in response to hypoxia ISO
Inferred from Sequence Orthology
more info
 
involved_in response to organic cyclic compound ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in caveola ISO
Inferred from Sequence Orthology
more info
 
located_in caveola ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
 
located_in endoplasmic reticulum ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in endoplasmic reticulum membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in extracellular space ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
prostacyclin synthase
Names
hydroperoxy icosatetraenoate dehydratase
NP_001407681.1
NP_001407682.1
NP_001407683.1
NP_001407684.1
NP_001407685.1
NP_032994.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001420752.1NP_001407681.1  prostacyclin synthase isoform b

    Status: VALIDATED

    Source sequence(s)
    AL591854
  2. NM_001420753.1NP_001407682.1  prostacyclin synthase isoform c

    Status: VALIDATED

    Source sequence(s)
    AL591854
  3. NM_001420754.1NP_001407683.1  prostacyclin synthase isoform c

    Status: VALIDATED

    Source sequence(s)
    AL591854
  4. NM_001420755.1NP_001407684.1  prostacyclin synthase isoform c

    Status: VALIDATED

    Source sequence(s)
    AL591854
  5. NM_001420756.1NP_001407685.1  prostacyclin synthase isoform d

    Status: VALIDATED

    Source sequence(s)
    AL591854
  6. NM_008968.5NP_032994.1  prostacyclin synthase isoform a

    See identical proteins and their annotated locations for NP_032994.1

    Status: VALIDATED

    Source sequence(s)
    AL591854
    Consensus CDS
    CCDS17097.1
    UniProtKB/Swiss-Prot
    O35074
    UniProtKB/TrEMBL
    Q8BXC0
    Related
    ENSMUSP00000018113.8, ENSMUST00000018113.8
    Conserved Domains (1) summary
    cl12078
    Location:28490
    p450; Cytochrome P450

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    167045114..167095069 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)