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Ptgir prostaglandin I receptor (IP) [ Mus musculus (house mouse) ]

Gene ID: 19222, updated on 2-Nov-2024

Summary

Official Symbol
Ptgirprovided by MGI
Official Full Name
prostaglandin I receptor (IP)provided by MGI
Primary source
MGI:MGI:99535
See related
Ensembl:ENSMUSG00000043017 AllianceGenome:MGI:99535
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
IP; PGI2
Summary
Predicted to enable prostacyclin receptor activity. Involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway; negative regulation of platelet-derived growth factor receptor signaling pathway; and negative regulation of smooth muscle cell proliferation. Acts upstream of or within response to lipopolysaccharide. Predicted to be located in cytosol. Predicted to be active in plasma membrane. Is expressed in several structures, including alimentary system; gallbladder; genitourinary system; hemolymphoid system gland; and limb segment. Orthologous to human PTGIR (prostaglandin I2 receptor). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Broad expression in mammary gland adult (RPKM 4.9), spleen adult (RPKM 4.5) and 19 other tissues See more
Orthologs
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Genomic context

See Ptgir in Genome Data Viewer
Location:
7 A2; 7 9.15 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (16640442..16644828)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (16906490..16910905)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene dishevelled-binding antagonist of beta-catenin 3 Neighboring gene guanine nucleotide binding protein (G protein), gamma 8 Neighboring gene calmodulin 3 Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:17509453-17509640 Neighboring gene predicted gene, 45972 Neighboring gene predicted gene, 32630

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (4) 
  • Targeted (1)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables prostacyclin receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
prostacyclin receptor
Names
PGI receptor
PGI2 receptor
prostaglandin I2 receptor
prostanoid IP receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001417172.1NP_001404101.1  prostacyclin receptor isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC148981
    UniProtKB/TrEMBL
    E9PY53
    Related
    ENSMUSP00000083270.6, ENSMUST00000086101.6
  2. NM_008967.4NP_032993.2  prostacyclin receptor isoform 1

    See identical proteins and their annotated locations for NP_032993.2

    Status: VALIDATED

    Source sequence(s)
    AC148981
    Consensus CDS
    CCDS20857.2
    UniProtKB/Swiss-Prot
    P43252, Q52KE5
    UniProtKB/TrEMBL
    Q3U4F1
    Related
    ENSMUSP00000122080.2, ENSMUST00000144408.2
    Conserved Domains (2) summary
    pfam00001
    Location:58318
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:55246
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    16640442..16644828
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)