U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Rwdd4a RWD domain containing 4A [ Mus musculus (house mouse) ]

Gene ID: 192174, updated on 2-Nov-2024

Summary

Official Symbol
Rwdd4aprovided by MGI
Official Full Name
RWD domain containing 4Aprovided by MGI
Primary source
MGI:MGI:2681000
See related
Ensembl:ENSMUSG00000031568 AllianceGenome:MGI:2681000
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Rwdd4; Gm1942
Summary
Is expressed in cerebral cortex ventricular layer and cortical plate. Orthologous to human RWDD4 (RWD domain containing 4). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in CNS E11.5 (RPKM 9.6), testis adult (RPKM 8.8) and 28 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Rwdd4a in Genome Data Viewer
Location:
8 B1.1; 8 26.86 cM
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (47986680..48005872)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (47533645..47552837)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_21409 Neighboring gene predicted gene, 22857 Neighboring gene trafficking protein particle complex 11 Neighboring gene STARR-positive B cell enhancer ABC_E1754 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:48619048-48619157 Neighboring gene predicted gene, 39172 Neighboring gene spermatogenesis associated 2 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • MGC27606

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
RWD domain-containing protein 4
Names
RWD domain-containing protein 4A

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_203507.3NP_987103.1  RWD domain-containing protein 4

    See identical proteins and their annotated locations for NP_987103.1

    Status: VALIDATED

    Source sequence(s)
    BB610203, BC016198, CJ227983
    Consensus CDS
    CCDS22297.1
    UniProtKB/Swiss-Prot
    Q9CPR1
    Related
    ENSMUSP00000033973.8, ENSMUST00000033973.14
    Conserved Domains (1) summary
    pfam05773
    Location:5107
    RWD; RWD domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    47986680..48005872
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)